RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 ZBTB10Q96DT7 871 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
BRCA1-218ENST00000489037 NKX2-4Q9H2Z4 354 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
BRCA1-218ENST00000489037 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 SQORQ9Y6N5 450 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 TLL1O43897 1013 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 ZNF862O60290 1169 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 P4HBP07237 508 aaKnown RBP16.04■□□□□ 0.16
BRCA1-218ENST00000489037 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
BRCA1-218ENST00000489037 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 EPHA7Q15375 998 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 UGCGQ16739 394 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 TSHZ1Q6ZSZ6 1077 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 HAS1Q92839 578 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-218ENST00000489037 VAV3Q9UKW4 847 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
BRCA1-218ENST00000489037 SIP14410 1827 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 SZT2Q5T011 3432 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 ZBTB42B2RXF5 422 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 H3BQV1 296 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 C22orf31O95567 290 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 MCM7P33993 719 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 TXKP42681 527 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 DEFB103AP81534 67 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 ORC2Q13416 577 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-218ENST00000489037 LPIN1Q14693 890 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 MTERF2Q49AM1 385 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 FBXO47Q5MNV8 452 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 EFCAB12Q6NXP0 572 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 NOSTRINQ8IVI9 506 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 MYOCDQ8IZQ8 938 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 BANK1Q8NDB2 785 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 JPH2Q9BR39 696 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-218ENST00000489037 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-218ENST00000489037 AKT3Q9Y243 479 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 STXBP5LQ9Y2K9 1186 aa16.03■□□□□ 0.16
BRCA1-218ENST00000489037 KDM3AQ9Y4C1 1321 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 EML1O00423 815 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 GJB2P29033 226 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 DNM2P50570 870 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 PAK2Q13177 524 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 TCTN1Q2MV58 587 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 MCTP1Q6DN14 999 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 FAM43BQ6ZT52 329 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 EXOC8Q8IYI6 725 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 GAS2L1Q99501 681 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 RAD9AQ99638 391 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 FTHL17Q9BXU8 183 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
BRCA1-218ENST00000489037 YBX2Q9Y2T7 364 aaKnown RBP16.02■□□□□ 0.16
BRCA1-218ENST00000489037 GJB5O95377 273 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 MYOGP15173 224 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 ZNF174Q15697 407 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 TTC38Q5R3I4 469 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 FAM117BQ6P1L5 589 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRCA1-218ENST00000489037 NEK9Q8TD19 979 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 ZSWIM4Q9H7M6 989 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 INSL6Q9Y581 213 aa16.01■□□□□ 0.15
BRCA1-218ENST00000489037 RPS6KA5O75582 802 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 CA3P07451 260 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 FOSL2P15408 326 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■□□ 19.1
BRCA1-218ENST00000489037 CD52P31358 61 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 CLCN3P51790 818 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 CRYBB1P53674 252 aaPredicted RBP16■□□□□ 0.15
BRCA1-218ENST00000489037 CDC42EP1Q00587 391 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 NFX1Q12986 1120 aaKnown RBP16■□□□□ 0.15
BRCA1-218ENST00000489037 GRIN2CQ14957 1233 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 TPH2Q8IWU9 490 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 C4orf19Q8IY42 314 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 LRRC71Q8N4P6 559 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 MYLIPQ8WY64 445 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 DYDC2Q96IM9 177 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 MTMR9Q96QG7 549 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 LXNQ9BS40 222 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 OSBPL7Q9BZF2 842 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 PPME1Q9Y570 386 aa16■□□□□ 0.15
BRCA1-218ENST00000489037 TTC3P53804 2025 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 GPR182O15218 404 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 UPP2O95045 317 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms