RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 CNNM4Q6P4Q7 775 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 CTAGE6Q86UF2 777 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 CTAGE4Q8IX94 777 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 CCDC47Q96A33 483 aaKnown RBP8.36□□□□□ -1.07
BEST3-205ENST00000488961 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 IFIH1Q9BYX4 1025 aaKnown RBP8.36□□□□□ -1.07
BEST3-205ENST00000488961 PCIF1Q9H4Z3 704 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 ZNHIT6Q9NWK9 470 aaKnown RBP8.36□□□□□ -1.07
BEST3-205ENST00000488961 CHCHD3Q9NX63 227 aaKnown RBP8.36□□□□□ -1.07
BEST3-205ENST00000488961 RAB21Q9UL25 225 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
BEST3-205ENST00000488961 NHSQ6T4R5 1651 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 ABCB11O95342 1321 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SHOX2O60902 331 aaPredicted RBP8.35□□□□□ -1.07
BEST3-205ENST00000488961 GCNT3O95395 438 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 MYBL1P10243 752 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 DNM2P50570 870 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 CYP2J2P51589 502 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 KIF11P52732 1056 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 RNF187Q5TA31 235 aaPredicted RBP8.35□□□□□ -1.07
BEST3-205ENST00000488961 MYOCDQ8IZQ8 938 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 REEP2Q9BRK0 252 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SLC40A1Q9NP59 571 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 ACP6Q9NPH0 428 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
BEST3-205ENST00000488961 CAPN11Q9UMQ6 739 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 PSMD14O00487 310 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 OPLAHO14841 1288 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 ZEB2O60315 1214 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 ADAM9Q13443 819 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SNCBQ16143 134 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 PHLDB2Q86SQ0 1253 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 SCFD1Q8WVM8 642 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 MTMR8Q96EF0 704 aa8.35□□□□□ -1.07
BEST3-205ENST00000488961 WRAP73Q9P2S5 460 aaPredicted RBP8.35□□□□□ -1.07
BEST3-205ENST00000488961 GRIN2DO15399 1336 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 LY75O60449 1722 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MSH4O15457 936 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 NR2F2P24468 414 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 COPB2P35606 906 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 SPAG1Q07617 926 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 FAM182AQ5T1J6 154 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 NAA35Q5VZE5 725 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 UNC13DQ70J99 1090 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MYLK4Q86YV6 388 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MSANTD4Q8NCY6 345 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 FAM76AQ8TAV0 307 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 EZH1Q92800 747 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 THAP9Q9H5L6 903 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 ATF5Q9Y2D1 282 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MAFGO15525 162 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MEFVO15553 781 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 TLR2O60603 784 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 RASSF9O75901 435 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 KIF4AO95239 1232 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 ARP10275 920 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 CYP11B2P19099 503 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 EEF1GP26641 437 aaKnown RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 AMPD3Q01432 767 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 LAMB3Q13751 1172 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 LRRC55Q6ZSA7 311 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MSL3Q8N5Y2 521 aaKnown RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 B4GALNT2Q8NHY0 566 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 FAM163AQ96GL9 167 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 DYDC2Q96IM9 177 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 TTYH3Q9C0H2 523 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 PI4KBQ9UBF8 816 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 DMGDHQ9UI17 866 aaKnown RBP8.34□□□□□ -1.07
BEST3-205ENST00000488961 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 PCDHGA4Q9Y5G9 962 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 MYH11P35749 1972 aa8.34□□□□□ -1.07
BEST3-205ENST00000488961 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.08
BEST3-205ENST00000488961 BMP3P12645 472 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 GGCXP38435 758 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 PRPHP41219 470 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 MAGEA1P43355 309 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 CDR1P51861 262 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SPA17Q15506 151 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms