RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ODR4Q5SWX8 454 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 GTF3C6Q969F1 213 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 NAP1L4Q99733 375 aaKnown RBP15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 COL25A1Q9BXS0 654 aaPredicted RBP15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 BRMS1Q9HCU9 246 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 ORC3Q9UBD5 711 aaPredicted RBP15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 MTUS1Q9ULD2 1270 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 KCNJ14Q9UNX9 436 aa15.59■□□□□ 0.09
SPTLC1-207ENST00000488921 PRRC2BQ5JSZ5 2229 aaKnown RBP15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 ZBTB42B2RXF5 422 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 MAGEB2O15479 319 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 CHMP2AO43633 222 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 EDIL3O43854 480 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 PSMD10O75832 226 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 TDP2O95551 362 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 C22orf31O95567 290 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 OATP04181 439 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 ATP4AP20648 1035 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 CD52P31358 61 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 NEK4P51957 841 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 SPRED2Q7Z698 418 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 FBXO22Q8NEZ5 403 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 GDPD5Q8WTR4 605 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 MBOAT7Q96N66 472 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 UNC45AQ9H3U1 944 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 DDX25Q9UHL0 483 aaKnown RBP15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 VCANP13611 3396 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 REV3LO60673 3130 aa15.58■□□□□ 0.08
SPTLC1-207ENST00000488921 KIAA1671Q9BY89 1806 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 TMOD1P28289 359 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 PRKCEQ02156 737 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 SKIV2LQ15477 1246 aaKnown RBP15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 INF2Q27J81 1249 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 LETM2Q2VYF4 491 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 MIER3Q7Z3K6 550 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 NEK8Q86SG6 692 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 ZNF710Q8N1W2 664 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 IL27Q8NEV9 243 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 MAP7D2Q96T17 732 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 SUGCTQ9HAC7 445 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 PADI3Q9ULW8 664 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 RWDD3Q9Y3V2 267 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 ADGRA3Q8IWK6 1321 aa15.57■□□□□ 0.08
SPTLC1-207ENST00000488921 ENPP3O14638 875 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 LPXNO60711 386 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 RPS6KA5O75582 802 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 CTDNEP1O95476 244 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 MRPS5P82675 430 aaKnown RBP15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 ME3Q16798 604 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 AAK1Q2M2I8 961 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 PPP4R3AQ6IN85 833 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 TRMT1LQ7Z2T5 733 aaKnown RBP15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 KIAA0319LQ8IZA0 1049 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 FIBCD1Q8N539 461 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 METTL13Q8N6R0 699 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 ETNPPLQ8TBG4 499 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 C17orf80Q9BSJ5 609 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 PRDM6Q9NQX0 595 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 GINS2Q9Y248 185 aa15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 SPTBN5Q9NRC6 3674 aaKnown RBP15.56■□□□□ 0.08
SPTLC1-207ENST00000488921 STAG3L1P0CL83 205 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 KRT2P35908 639 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 CRYBB1P53674 252 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 PTPROQ16827 1216 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 EPC2Q52LR7 807 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 LINC01599Q8WXQ3 324 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 COG5Q9UP83 839 aa15.55■□□□□ 0.08
SPTLC1-207ENST00000488921 ARID2Q68CP9 1835 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 RBAK-RBAKDNI3L0D1 243 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 TBX3O15119 743 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 GPR182O15218 404 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 SLC37A4O43826 429 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 ZNF862O60290 1169 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 CCNT1O60563 726 aaKnown RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 DKC1O60832 514 aaKnown RBP eCLIP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 LARGE1O95461 756 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 TBC1D8BQ0IIM8 1120 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 NFX1Q12986 1120 aaKnown RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 TRIM29Q14134 588 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 XKR3Q5GH77 459 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 KRT40Q6A162 431 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 B3GNT9Q6UX72 402 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 TMEM192Q8IY95 271 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 ASB2Q96Q27 587 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 RC3H2Q9HBD1 1191 aaKnown RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 KCNMB3Q9NPA1 279 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 SEPT9Q9UHD8 586 aaPredicted RBP15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 AKT3Q9Y243 479 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 ATG2AQ2TAZ0 1938 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 XIRP2A4UGR9 3374 aa15.54■□□□□ 0.08
SPTLC1-207ENST00000488921 FNDC1Q4ZHG4 1894 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms