RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 GLT1D1Q96MS3 346 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
TRAIP-209ENST00000488860 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 BHMT2Q9H2M3 363 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 BLOC1S4Q9NUP1 217 aa13.74□□□□□ -0.21
TRAIP-209ENST00000488860 HBP1O60381 514 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
TRAIP-209ENST00000488860 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
TRAIP-209ENST00000488860 CABYRO75952 493 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 STBD1O95210 358 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 MBD3O95983 291 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 SMIM10L2AP0DMW4 78 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 SMIM10L2BP0DMW5 78 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 RARRES1P49788 294 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 NPEPPSP55786 919 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 GRIK4Q16099 956 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 E2F4Q16254 413 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 TRAPPC12Q8WVT3 735 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 STAMQ92783 540 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 CUEDC2Q9H467 287 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 STARD7Q9NQZ5 370 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 CYP26B1Q9NR63 512 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 ANKEF1Q9NU02 776 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 PHF24Q9UPV7 400 aa13.73□□□□□ -0.21
TRAIP-209ENST00000488860 KIAA0100Q14667 2235 aaKnown RBP13.73□□□□□ -0.21
TRAIP-209ENST00000488860 HAS3O00219 553 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 ACTN4O43707 911 aaKnown RBP13.72□□□□□ -0.21
TRAIP-209ENST00000488860 INSRRP14616 1297 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 AFMP43652 599 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
TRAIP-209ENST00000488860 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
TRAIP-209ENST00000488860 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 SV2BQ7L1I2 683 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 GPBP1Q86WP2 473 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 ENGASEQ8NFI3 743 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 DIS3LQ8TF46 1054 aaKnown RBP13.72□□□□□ -0.21
TRAIP-209ENST00000488860 MAGEF1Q9HAY2 307 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
TRAIP-209ENST00000488860 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
TRAIP-209ENST00000488860 COL1A2P08123 1366 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 ALPK3Q96L96 1907 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
TRAIP-209ENST00000488860 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.21
TRAIP-209ENST00000488860 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 TBC1D8BQ0IIM8 1120 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 ITGA7Q13683 1181 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 PADI6Q6TGC4 694 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 MAEAQ7L5Y9 396 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 KCTD17Q8N5Z5 321 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 CCDC34Q96HJ3 373 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 NIFKQ9BYG3 293 aaKnown RBP13.71□□□□□ -0.21
TRAIP-209ENST00000488860 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.21
TRAIP-209ENST00000488860 TNMDQ9H2S6 317 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
TRAIP-209ENST00000488860 SIP14410 1827 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 XRCC6P12956 609 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAIP-209ENST00000488860 CASP1P29466 404 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
TRAIP-209ENST00000488860 EMC2Q15006 297 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 DYMQ7RTS9 669 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
TRAIP-209ENST00000488860 ANKLE1Q8NAG6 615 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 LMBR1Q8WVP7 490 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 SLC7A3Q8WY07 619 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 MTRQ99707 1265 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 ATP6V0A4Q9HBG4 840 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 TUBE1Q9UJT0 475 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
TRAIP-209ENST00000488860 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 MYMKA6NI61 221 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ZBTB42B2RXF5 422 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 CYP11B2P19099 503 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 EN2P19622 333 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 RFC5P40937 340 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ASIC1P78348 528 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 ZNF200P98182 395 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 TARBP2Q15633 366 aaKnown RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 CAMK4Q16566 473 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 GDF6Q6KF10 455 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-209ENST00000488860 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
TRAIP-209ENST00000488860 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms