RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 KDM3AQ9Y4C1 1321 aa17.96■□□□□ 0.46
CTDSP1-209ENST00000488627 TMEM62Q0P6H9 643 aa17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 MTMR9Q96QG7 549 aa17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 NIFKQ9BYG3 293 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 CELF4Q9BZC1 486 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 TRPV2Q9Y5S1 764 aa17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
CTDSP1-209ENST00000488627 CDH23Q9H251 3354 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 ARHGEF15O94989 841 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 APBB2Q92870 758 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 CDHR5Q9HBB8 845 aa17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 WRAP73Q9P2S5 460 aaPredicted RBP17.94■□□□□ 0.46
CTDSP1-209ENST00000488627 TMEM150BA6NC51 233 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 MAGEB2O15479 319 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 GJB5O95377 273 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 CA3P07451 260 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 PSMC5P62195 406 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 EPHA7Q15375 998 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 CALCRLQ16602 461 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 TSHZ1Q6ZSZ6 1077 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 ANO5Q75V66 913 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 SLC28A3Q9HAS3 691 aa17.93■□□□□ 0.46
CTDSP1-209ENST00000488627 MARCH6O60337 910 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 NEMFO60524 1076 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 GPR32O75388 356 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 QARSP47897 775 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 EFCAB12Q6NXP0 572 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 NOSTRINQ8IVI9 506 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 METTL13Q8N6R0 699 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 MYLIPQ8WY64 445 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 RGL1Q9NZL6 768 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 PCDHA12Q9UN75 941 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 COL6A3P12111 3177 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 CHD9Q3L8U1 2897 aa17.92■□□□□ 0.46
CTDSP1-209ENST00000488627 IGKV6-21A0A0C4DH24 114 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 M0QZ92 97 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 ENPP3O14638 875 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 TLL1O43897 1013 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 AMHP03971 560 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 VTNP04004 478 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 CD52P31358 61 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 MCM7P33993 719 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 CLCN3P51790 818 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 TAP1Q03518 808 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 PPP2R2DQ66LE6 453 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 RTN4RL1Q86UN2 441 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 LRRC71Q8N4P6 559 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 TMEM40Q8WWA1 233 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 TOP1MTQ969P6 601 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 RAD9AQ99638 391 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 HSD17B14Q9BPX1 270 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 SH2D3AQ9BRG2 576 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 PADI3Q9ULW8 664 aa17.91■□□□□ 0.46
CTDSP1-209ENST00000488627 SLITRK3O94933 977 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 GJB2P29033 226 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 TXKP42681 527 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 TOB1P50616 345 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 HTRA4P83105 476 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 CUL4AQ13619 759 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 ZNF174Q15697 407 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 MTERF2Q49AM1 385 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 C4orf19Q8IY42 314 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 MYOCDQ8IZQ8 938 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 C4orf32Q8N8J7 132 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 ZNF579Q8NAF0 562 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 LINC01599Q8WXQ3 324 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 DYDC2Q96IM9 177 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 ADAMTS10Q9H324 1103 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 TMX1Q9H3N1 280 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 PRDM12Q9H4Q4 367 aa17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 SEPT9Q9UHD8 586 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-209ENST00000488627 KAT6AQ92794 2004 aa17.89■□□□□ 0.46
CTDSP1-209ENST00000488627 ZBTB39O15060 712 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 CRYBB1P53674 252 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 DRP2Q13474 957 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 ADGRE1Q14246 886 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 FAM117BQ6P1L5 589 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms