RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 HIP1RO75146 1068 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 GCNT3O95395 438 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 ACTR2P61160 394 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 KNOP1Q1ED39 458 aaKnown RBP22.33■■□□□ 1.16
NECAB3-213ENST00000488489 BMT2Q1RMZ1 405 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 ANO5Q75V66 913 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 MAEAQ7L5Y9 396 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 ZNF526Q8TF50 670 aaPredicted RBP22.33■■□□□ 1.16
NECAB3-213ENST00000488489 NOC4LQ9BVI4 516 aaKnown RBP22.33■■□□□ 1.16
NECAB3-213ENST00000488489 GABBR1Q9UBS5 961 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 PNMA3Q9UL41 463 aa22.33■■□□□ 1.16
NECAB3-213ENST00000488489 ZNFX1Q9P2E3 1918 aaKnown RBP22.32■■□□□ 1.16
NECAB3-213ENST00000488489 RNF225M0QZC1 329 aaPredicted RBP22.32■■□□□ 1.16
NECAB3-213ENST00000488489 BACH1O14867 736 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 FGFR1OPO95684 399 aaKnown RBP22.32■■□□□ 1.16
NECAB3-213ENST00000488489 NPEPPSP55786 919 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 PLA2G4FQ68DD2 849 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 CYFIP1Q7L576 1253 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 CCDC112Q8NEF3 446 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 EFCC1Q9HA90 598 aa22.32■■□□□ 1.16
NECAB3-213ENST00000488489 CASP14P31944 242 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 COPB2P35606 906 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 FXR1P51114 621 aaKnown RBP eCLIP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 KCTD2Q14681 263 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ZC2HC1CQ53FD0 456 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 WDR78Q5VTH9 848 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 SWSAP1Q6NVH7 229 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ABHD15Q6UXT9 468 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 EEPD1Q7L9B9 569 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 CCDC60Q8IWA6 550 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 SMCR8Q8TEV9 937 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 MMP19Q99542 508 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 MROH8Q9H579 483 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 USP27XA6NNY8 438 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 AKR1B15C9JRZ8 316 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 STBD1O95210 358 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ITGBL1O95965 494 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 DNM2P50570 870 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ODR4Q5SWX8 454 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ZNF720Q7Z2F6 126 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 PPFIBP1Q86W92 1011 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 ZC3H3Q8IXZ2 948 aaKnown RBP22.31■■□□□ 1.16
NECAB3-213ENST00000488489 IKZF4Q9H2S9 585 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 TRAF3IP3Q9Y228 551 aa22.31■■□□□ 1.16
NECAB3-213ENST00000488489 A0A1W2PQC6 194 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
NECAB3-213ENST00000488489 EDRF1Q3B7T1 1238 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 SEL1LQ9UBV2 794 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 SLC45A1Q9Y2W3 748 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 PSAPP07602 524 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 UBA1P22314 1058 aaKnown RBP22.3■■□□□ 1.16
NECAB3-213ENST00000488489 CBX1P83916 185 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 TBC1D8BQ0IIM8 1120 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 NYAP1Q6ZVC0 841 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 KSR1Q8IVT5 923 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 FAM178BQ8IXR5 827 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 ANKRD13CQ8N6S4 541 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 PTPN18Q99952 460 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 PRDM10Q9NQV6 1147 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 KCND1Q9NSA2 647 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 ANKEF1Q9NU02 776 aa22.3■■□□□ 1.16
NECAB3-213ENST00000488489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.3■■□□□ 1.163e-7■□□□□ 8.6
NECAB3-213ENST00000488489 LRRC37A2A6NM11 1700 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 ADAM9Q13443 819 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 XKR9Q5GH70 373 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 E4F1Q66K89 784 aaPredicted RBP22.29■■□□□ 1.16
NECAB3-213ENST00000488489 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 GPRC5AQ8NFJ5 357 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 CEP63Q96MT8 703 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 MCM3APO60318 1980 aa22.29■■□□□ 1.16
NECAB3-213ENST00000488489 PDXKO00764 312 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 EIF3DO15371 548 aaKnown RBP eCLIP22.28■■□□□ 1.16
NECAB3-213ENST00000488489 MFAP3LO75121 409 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 VWA3BQ502W6 1294 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 ANKRD23Q86SG2 305 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 SHCBP1Q8NEM2 672 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 BAG1Q99933 345 aaPredicted RBP22.28■■□□□ 1.16
NECAB3-213ENST00000488489 NDST4Q9H3R1 872 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 ZMYM2Q9UBW7 1377 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 SYNGAP1Q96PV0 1343 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 RASSF10A6NK89 507 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 TGFB1I1O43294 461 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 NR2F2P24468 414 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 KLK7P49862 253 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 MAN2A1Q16706 1144 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 ATP6V0A1Q93050 837 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
NECAB3-213ENST00000488489 MYH9P35579 1960 aaKnown RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 ATG7O95352 703 aa22.27■■□□□ 1.16
NECAB3-213ENST00000488489 SUPT20HL2P0C7V6 817 aa22.27■■□□□ 1.16
NECAB3-213ENST00000488489 ZBTB48P10074 688 aaPredicted RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 ZSCAN20P17040 1043 aaPredicted RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 DMTNQ08495 405 aa22.27■■□□□ 1.16
NECAB3-213ENST00000488489 GTF3C2Q8WUA4 911 aaPredicted RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 CCDC43Q96MW1 224 aaKnown RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 PANX2Q96RD6 677 aa22.27■■□□□ 1.16
NECAB3-213ENST00000488489 STRA6Q9BX79 667 aa22.27■■□□□ 1.16
NECAB3-213ENST00000488489 TYW1Q9NV66 732 aaKnown RBP22.27■■□□□ 1.16
NECAB3-213ENST00000488489 FARP2O94887 1054 aaPredicted RBP22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms