RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 USP49Q70CQ1 688 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 TRMT1LQ7Z2T5 733 aaKnown RBP14.87□□□□□ -0.03
COL4A6-207ENST00000487645 PPP1R13LQ8WUF5 828 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 CDK5RAP3Q96JB5 506 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 CEP170P1Q96L14 293 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 PNMA5Q96PV4 448 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 CEP89Q96ST8 783 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 TRPV6Q9H1D0 765 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 CYP26B1Q9NR63 512 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
COL4A6-207ENST00000487645 CCDC39Q9UFE4 941 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
COL4A6-207ENST00000487645 ATP11BQ9Y2G3 1177 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 PCDHA2Q9Y5H9 948 aa14.87□□□□□ -0.03
COL4A6-207ENST00000487645 ZBTB39O15060 712 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 TREHO43280 583 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 PQBP1O60828 265 aaKnown RBP14.86□□□□□ -0.03
COL4A6-207ENST00000487645 EYA4O95677 639 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
COL4A6-207ENST00000487645 CMA1P23946 247 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-207ENST00000487645 FAAP100Q0VG06 881 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 PTK7Q13308 1070 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 GRB10Q13322 594 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 TMEM119Q4V9L6 283 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 XKR9Q5GH70 373 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 SHC4Q6S5L8 630 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 MTHFD1LQ6UB35 978 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 SERINC5Q86VE9 423 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 PIGOQ8TEQ8 1089 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 JPH2Q9BR39 696 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-207ENST00000487645 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 TRMT13Q9NUP7 481 aaKnown RBP14.86□□□□□ -0.03
COL4A6-207ENST00000487645 TUBE1Q9UJT0 475 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 NOD1Q9Y239 953 aa14.86□□□□□ -0.03
COL4A6-207ENST00000487645 MYH11P35749 1972 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 A0A1W2PQ27 194 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 A0A1W2PQ64 194 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 A0A1W2PQD8 194 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 RFC5P40937 340 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 RARRES1P49788 294 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 NPEPPSP55786 919 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 IGBP1P78318 339 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 TBC1D8BQ0IIM8 1120 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 KARSQ15046 597 aaKnown RBP14.85□□□□□ -0.03
COL4A6-207ENST00000487645 ZRSR1Q15695 479 aaKnown RBP14.85□□□□□ -0.03
COL4A6-207ENST00000487645 MTERF2Q49AM1 385 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 RESP18Q5W5W9 173 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 PLA2G4FQ68DD2 849 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 NME8Q8N427 588 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 RETREG2Q8NC44 543 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 TRAPPC12Q8WVT3 735 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 CTAGE1Q96RT6 745 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 FAM13BQ9NYF5 915 aa14.85□□□□□ -0.03
COL4A6-207ENST00000487645 TNRC18O15417 2968 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 A0A087WWV3 80 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 IGKV6-21A0A0C4DH24 114 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 SMIM35A0A1B0GVV1 85 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 TMEM150BA6NC51 233 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 GAS2O43903 313 aaKnown RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 EVI5O60447 810 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 MAFO75444 373 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 C22orf31O95567 290 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 CLTBP09497 229 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 CYP2C9P11712 490 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 TMOD1P28289 359 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 RRAGBQ5VZM2 374 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 ZNF710Q8N1W2 664 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 RASSF8Q8NHQ8 419 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 DPF3Q92784 378 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 CCDC43Q96MW1 224 aaKnown RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 PYM1Q9BRP8 204 aaKnown RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 DHX33Q9H6R0 707 aaKnown RBP14.84□□□□□ -0.03
COL4A6-207ENST00000487645 PDLIM7Q9NR12 457 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 STK17AQ9UEE5 414 aa14.84□□□□□ -0.03
COL4A6-207ENST00000487645 FAM237AA0A1B0GTK4 181 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 GOLGA6L4A6NEF3 574 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 E9PMD0 336 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 KIAA0355O15063 1070 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 CAND2O75155 1236 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 DGAT1O75907 488 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 PLCG1P19174 1290 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 DNM2P50570 870 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 RBL2Q08999 1139 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 BFSP2Q13515 415 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 EFCAB12Q6NXP0 572 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 KCNK18Q7Z418 384 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 RSPH3Q86UC2 560 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 CCDC155Q8N6L0 562 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 SYT2Q8N9I0 419 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-207ENST00000487645 TMEM87AQ8NBN3 555 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 CAGE1Q8TC20 777 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 SLC7A3Q8WY07 619 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 PLIN2Q99541 437 aa14.83□□□□□ -0.04
COL4A6-207ENST00000487645 SH2D3AQ9BRG2 576 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms