RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
PRKCB-207ENST00000486868 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
PRKCB-207ENST00000486868 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
PRKCB-207ENST00000486868 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
PRKCB-207ENST00000486868 IGKV6D-21A0A0A0MT36 114 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 GOLGA6L9A6NEM1 432 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 ASB14A6NK59 587 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 STRNO43815 780 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 COBLO75128 1261 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 STBD1O95210 358 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 GYPCP04921 128 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 SUPT20HL2P0C7V6 817 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 PLS3P13797 630 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 ACTR2P61160 394 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 RBL2Q08999 1139 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 ADAM9Q13443 819 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 FAM178BQ8IXR5 827 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 C12orf56Q8IXR9 622 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
PRKCB-207ENST00000486868 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 MMP19Q99542 508 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 FGFBP2Q9BYJ0 223 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 ZHX3Q9H4I2 956 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 TMEM206Q9H813 350 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 ASTN1O14525 1302 aa12.83□□□□□ -0.36
PRKCB-207ENST00000486868 COL11A1P12107 1806 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-207ENST00000486868 RSPH10B2B2RC85 870 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 ZBTB39O15060 712 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 ZSCAN12O43309 604 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 HIP1RO75146 1068 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 DGAT1O75907 488 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 GCNT3O95395 438 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 RSPH10BP0C881 870 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 HOXD13P35453 343 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 Q3C1V9 767 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 TMTC1Q8IUR5 882 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 DAW1Q8N136 415 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 CCDC43Q96MW1 224 aaKnown RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 NTPCRQ9BSD7 190 aaKnown RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 TTYH3Q9C0H2 523 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 PDLIM7Q9NR12 457 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 DMAC2Q9NW81 257 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 PKD2L1Q9P0L9 805 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-207ENST00000486868 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
PRKCB-207ENST00000486868 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 BTBD19C9JJ37 291 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 H0YCG3 227 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 PDHXO00330 501 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 MAPK13O15264 365 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 MYBP10242 640 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 NR2F2P24468 414 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 CASP14P31944 242 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 CASP5P51878 434 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 ZBED6P86452 979 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 GTF2BQ00403 316 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 CDK17Q00537 523 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 IRF5Q13568 498 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 CCL15Q16663 113 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 UGCGQ16739 394 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 XKR9Q5GH70 373 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 E4F1Q66K89 784 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 METTL7BQ6UX53 244 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 NELFCDQ8IXH7 590 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 OR8K1Q8NGG5 319 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 BRI3BPQ8WY22 251 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 FGD4Q96M96 766 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 NIFKQ9BYG3 293 aaKnown RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 SIK3Q9Y2K2 1263 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 LUC7L2Q9Y383 392 aaKnown RBP12.81□□□□□ -0.36
PRKCB-207ENST00000486868 DAAM1Q9Y4D1 1078 aa12.81□□□□□ -0.36
PRKCB-207ENST00000486868 TGFB1I1O43294 461 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms