RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 LCHNA4D1U4 455 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 GTPBP6O43824 516 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-208ENST00000486404 SLC37A4O43826 429 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 UPP2O95045 317 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 C22orf31O95567 290 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 FDPSP14324 419 aaKnown RBP14.52□□□□□ -0.09
CHMP3-208ENST00000486404 TAP1Q03518 808 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHMP3-208ENST00000486404 NME8Q8N427 588 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 METTL13Q8N6R0 699 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 USP38Q8NB14 1042 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 ETNPPLQ8TBG4 499 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 MBOAT7Q96N66 472 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 MAP7D2Q96T17 732 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 SEPT9Q9UHD8 586 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-208ENST00000486404 MTUS1Q9ULD2 1270 aa14.52□□□□□ -0.09
CHMP3-208ENST00000486404 KIAA1671Q9BY89 1806 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 EDIL3O43854 480 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 PSMD10O75832 226 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 MMP1P03956 469 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 CD52P31358 61 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 NR5A1Q13285 461 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 PPP4R3AQ6IN85 833 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 DIS3L2Q8IYB7 885 aaKnown RBP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 CELF4Q9BZC1 486 aaKnown RBP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 OSBPL7Q9BZF2 842 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 SH2B1Q9NRF2 756 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-208ENST00000486404 NRBP2Q9NSY0 501 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 INSL6Q9Y581 213 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 CHD7Q9P2D1 2997 aa14.51□□□□□ -0.09
CHMP3-208ENST00000486404 TTC3P53804 2025 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 ZBTB42B2RXF5 422 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 MAGEB2O15479 319 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 ST18O60284 1047 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 ATP4AP20648 1035 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 TMOD1P28289 359 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 HMGN5P82970 282 aaKnown RBP14.5□□□□□ -0.09
CHMP3-208ENST00000486404 TBC1D8BQ0IIM8 1120 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 GNL2Q13823 731 aaKnown RBP14.5□□□□□ -0.09
CHMP3-208ENST00000486404 RABEP1Q15276 862 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 UGCGQ16739 394 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 KRT40Q6A162 431 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 FAM184AQ8NB25 1140 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 C8orf76Q96K31 380 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 FAM20AQ96MK3 541 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 TGS1Q96RS0 853 aaKnown RBP14.5□□□□□ -0.09
CHMP3-208ENST00000486404 PPP1R16BQ96T49 567 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 LLPHQ9BRT6 129 aaKnown RBP14.5□□□□□ -0.09
CHMP3-208ENST00000486404 FTHL17Q9BXU8 183 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 AKT3Q9Y243 479 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 SQORQ9Y6N5 450 aa14.5□□□□□ -0.09
CHMP3-208ENST00000486404 KDM3AQ9Y4C1 1321 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-208ENST00000486404 LINC01553A4QN01 128 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 FAM205CA6NFA0 338 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 TBX3O15119 743 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 ARHGEF15O94989 841 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
CHMP3-208ENST00000486404 RBM25P49756 843 aaKnown RBP14.49□□□□□ -0.09
CHMP3-208ENST00000486404 CLCN3P51790 818 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 ST3GAL1Q11201 340 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 ADGRE1Q14246 886 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 MTERF2Q49AM1 385 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 ODR4Q5SWX8 454 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 BANK1Q8NDB2 785 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 GDPD5Q8WTR4 605 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 KCNMB3Q9NPA1 279 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 TRANK1O15050 2925 aa14.49□□□□□ -0.09
CHMP3-208ENST00000486404 EYSQ5T1H1 3165 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 BTBD18B2RXH4 712 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 ZNF862O60290 1169 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 NEMFO60524 1076 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 DKC1O60832 514 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 RPS6KA5O75582 802 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 VTNP04004 478 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 IBSPP21815 317 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 PSMC5P62195 406 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 GUCY1B3Q02153 619 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 NFX1Q12986 1120 aaKnown RBP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 PPP2R5CQ13362 524 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 CCDC85BQ15834 202 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 CALCRLQ16602 461 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 KIZQ2M2Z5 673 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 TMEM266Q2M3C6 531 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 XKR3Q5GH77 459 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 EARS2Q5JPH6 523 aaKnown RBP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 NCAPH2Q6IBW4 605 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 KIAA0319LQ8IZA0 1049 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 LRRC71Q8N4P6 559 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 TOP1MTQ969P6 601 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 OSMRQ99650 979 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-208ENST00000486404 AGO3Q9H9G7 860 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms