RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
PKP4-213ENST00000486254 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 SCN4AP35499 1836 aa13.17□□□□□ -0.3
PKP4-213ENST00000486254 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 CXCL11O14625 94 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 IRF6O14896 467 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 MYBP10242 640 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
PKP4-213ENST00000486254 SCP2P22307 547 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 CASQ1P31415 396 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 COPB2P35606 906 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 IREB2P48200 963 aaKnown RBP13.16□□□□□ -0.3
PKP4-213ENST00000486254 RARRES1P49788 294 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
PKP4-213ENST00000486254 TUBB4BP68371 445 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
PKP4-213ENST00000486254 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 FAM178BQ8IXR5 827 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 KCNN1Q92952 543 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 HVCN1Q96D96 273 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 WNK4Q96J92 1243 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
PKP4-213ENST00000486254 RIPK3Q9Y572 518 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 ATP8B3O60423 1300 aa13.16□□□□□ -0.3
PKP4-213ENST00000486254 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 MAPK13O15264 365 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 FANCGO15287 622 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 ANXA13P27216 316 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ICAM3P32942 547 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ABCD1P33897 745 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 PDXDC1Q6P996 788 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 PRRT2Q7Z6L0 340 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 MYCT1Q8N699 235 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 WDR24Q96S15 920 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 CHP1Q99653 195 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 GBP3Q9H0R5 595 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 C17orf75Q9HAS0 396 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 DMAC2Q9NW81 257 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ARID2Q68CP9 1835 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
PKP4-213ENST00000486254 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 KCNA2P16389 499 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 NF2P35240 595 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ODR4Q5SWX8 454 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 FMNL3Q8IVF7 1028 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 DAW1Q8N136 415 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ACRBPQ8NEB7 543 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
PKP4-213ENST00000486254 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 MRFAP1Q9Y605 127 aa13.15□□□□□ -0.3
PKP4-213ENST00000486254 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 RBAK-RBAKDNI3L0D1 243 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 KRT86O43790 486 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 HIP1RO75146 1068 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 CCNE2O96020 404 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 PLS3P13797 630 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 PSMC2P35998 433 aaKnown RBP13.14□□□□□ -0.31
PKP4-213ENST00000486254 KLK7P49862 253 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 RTP1P59025 263 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
PKP4-213ENST00000486254 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
PKP4-213ENST00000486254 MMRN2Q9H8L6 949 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 FAM207AQ9NSI2 230 aaPredicted RBP13.14□□□□□ -0.31
PKP4-213ENST00000486254 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
PKP4-213ENST00000486254 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
PKP4-213ENST00000486254 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 EPHB6O15197 1021 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms