RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 DUSP12Q9UNI6 340 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 USTQ9Y2C2 406 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 DENND4AQ7Z401 1863 aa9.67□□□□□ -0.86
XRN1-212ENST00000486211 KRBA1A5PL33 1030 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 DGAT1O75907 488 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 EOMESO95936 686 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 NR3C2P08235 984 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 PDHBP11177 359 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 GNAT1P11488 350 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 EIF2AK2P19525 551 aaKnown RBP9.66□□□□□ -0.86
XRN1-212ENST00000486211 UBA1P22314 1058 aaKnown RBP9.66□□□□□ -0.86
XRN1-212ENST00000486211 TGM1P22735 817 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 MTHFRP42898 656 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 TDGQ13569 410 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 USH1GQ495M9 461 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 APPBP2Q92624 585 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 CASP10Q92851 521 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 SLC6A16Q9GZN6 736 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 BCAS3Q9H6U6 928 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
XRN1-212ENST00000486211 PCDHB12Q9Y5F1 795 aa9.66□□□□□ -0.86
XRN1-212ENST00000486211 ANKRD11Q6UB99 2663 aaPredicted RBP9.66□□□□□ -0.86
XRN1-212ENST00000486211 TSPY2A6NKD2 308 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR5-ARHGAP8B1AHC4 643 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PATL2C9JE40 543 aaKnown RBP9.65□□□□□ -0.86
XRN1-212ENST00000486211 M0R2C6 588 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 GNAT2P19087 354 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 CD52P31358 61 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 ARHGAP8P85298 464 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR20EP86478 221 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR20CP86479 221 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR20DP86480 221 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR20BP86481 221 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PRR20AP86496 221 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 LMNB2Q03252 620 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PPARAQ07869 468 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 ZNF543Q08ER8 600 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 COL9A3Q14050 684 aaPredicted RBP9.65□□□□□ -0.86
XRN1-212ENST00000486211 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 TRIM50Q86XT4 487 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 MAML2Q8IZL2 1156 aaPredicted RBP9.65□□□□□ -0.86
XRN1-212ENST00000486211 FEZF2Q8TBJ5 459 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
XRN1-212ENST00000486211 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 PXMP2Q9NR77 195 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 AAASQ9NRG9 546 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 TMEM260Q9NX78 707 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 FBXL21Q9UKT6 434 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 LZTS1Q9Y250 596 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 HCFC2Q9Y5Z7 792 aa9.65□□□□□ -0.86
XRN1-212ENST00000486211 FNDC1Q4ZHG4 1894 aaPredicted RBP9.65□□□□□ -0.86
XRN1-212ENST00000486211 APPP05067 770 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 STAG3L1P0CL83 205 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 SNHG28P0DPA3 235 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 SCG2P13521 617 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 ARHGEF16Q5VV41 709 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 KCNV1Q6PIU1 500 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 THNSL1Q8IYQ7 743 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
XRN1-212ENST00000486211 COLGALT1Q8NBJ5 622 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 MRPS27Q92552 414 aaKnown RBP9.64□□□□□ -0.87
XRN1-212ENST00000486211 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 NCDNQ9UBB6 729 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 CDY2AQ9Y6F7 541 aa9.64□□□□□ -0.87
XRN1-212ENST00000486211 ABCB11O95342 1321 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 CCDC171Q6TFL3 1326 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 NARSO43776 548 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 KINO60870 393 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 DCNP07585 359 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 SLC3A2P08195 630 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 TOP1P11387 765 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 RLBP1P12271 317 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 RARS2Q5T160 578 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 TAF2Q6P1X5 1199 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 C12orf76Q8N812 135 aaPredicted RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 KBTBD3Q8NAB2 608 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 IL31RAQ8NI17 732 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 FTHL17Q9BXU8 183 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 CPVLQ9H3G5 476 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 TMX1Q9H3N1 280 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 CWH43Q9H720 699 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 TBC1D17Q9HA65 648 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 KCNK12Q9HB15 430 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 NGRNQ9NPE2 291 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 ENTPD7Q9NQZ7 604 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms