RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RILPL1Q5EBL4 403 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TAPT1Q6NXT6 567 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 XRRA1Q6P2D8 792 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 MAMDC4Q6UXC1 1216 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 CYFIP1Q7L576 1253 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 CD163Q86VB7 1156 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 DHX37Q8IY37 1157 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 MSL3Q8N5Y2 521 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 OR6J1Q8NGC5 347 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 MORC4Q8TE76 937 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 ZNF396Q96N95 335 aaPredicted RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 USP28Q96RU2 1077 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 INSM2Q96T92 566 aaPredicted RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 NAP1L4Q99733 375 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 RNF208Q9H0X6 261 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TMEM60Q9H2L4 133 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 BCAS3Q9H6U6 928 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 MLXIPQ9HAP2 919 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 AGO4Q9HCK5 861 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 HMX1Q9NP08 348 aaPredicted RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 TCEAL9Q9UHQ7 104 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 IGLV3-22A0A075B6J6 115 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 LOC102724159A0A0B4J2E5 919 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 MEIS1O00470 390 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 NOP56O00567 594 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 SEPT4O43236 478 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 GAS7O60861 476 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 STAM2O75886 525 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 PGK1P00558 417 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 OR52Z1P0C646 297 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 C6orf222P0C671 652 aaPredicted RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 RARBP10826 455 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 PDIA4P13667 645 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 GCFC2P16383 781 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 UBA1P22314 1058 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 MARCKSP29966 332 aaPredicted RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 CIITAP33076 1130 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 TRAPPC10P48553 1259 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 BEX3Q00994 111 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 SP2Q02086 613 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 STK38Q15208 465 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 PWP2Q15269 919 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 Q4G0T1 1027 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 UTP14CQ5TAP6 766 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 LRCH2Q5VUJ6 765 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 IQSEC1Q6DN90 963 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 NCAPH2Q6IBW4 605 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 TRMT1LQ7Z2T5 733 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 TLK2Q86UE8 772 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 TEX2Q8IWB9 1127 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 SCFD2Q8WU76 684 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 CRYGNQ8WXF5 182 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 GPRASP2Q96D09 838 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 ZNF837Q96EG3 531 aaPredicted RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 CDHR1Q96JP9 859 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 INPP4AQ96PE3 977 aaPredicted RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 SDF4Q9BRK5 362 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 TEKT3Q9BXF9 490 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 KATNBL1Q9H079 304 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.35□□□□□ -1.39
COPS3-208ENST00000486032 AP5M1Q9H0R1 490 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 KCNH7Q9NS40 1196 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 DDX41Q9UJV9 622 aaKnown RBP6.35□□□□□ -1.39
COPS3-208ENST00000486032 KIAA1217Q5T5P2 1943 aa6.35□□□□□ -1.39
COPS3-208ENST00000486032 DOCK5Q9H7D0 1870 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 VWA3AA6NCI4 1184 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 SPATA31C2B4DYI2 1134 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 IPO5O00410 1097 aaKnown RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 GH1P01241 217 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 TFRCP02786 760 aaKnown RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 MYL3P08590 195 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 KCNA2P16389 499 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 ICAM3P32942 547 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 DDIT3P35638 169 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 TECP42680 631 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 KRT85P78386 507 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 ITGB3BPQ13352 177 aaPredicted RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 NEDD9Q14511 834 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 ZRSR1Q15695 479 aaKnown RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 TMEM266Q2M3C6 531 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 DUSP28Q4G0W2 176 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 MAP3K21Q5TCX8 1036 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 KCNV1Q6PIU1 500 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 MOXD1Q6UVY6 613 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 NIPA1Q7RTP0 329 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 MIER3Q7Z3K6 550 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 PPP1R13LQ8WUF5 828 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 AFG1LQ8WV93 481 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 LENG9Q96B70 501 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 SPATA33Q96N06 139 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 DEFB118Q96PH6 123 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 UNC45AQ9H3U1 944 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 TTC12Q9H892 705 aaPredicted RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 SPC25Q9HBM1 224 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 XPNPEP3Q9NQH7 507 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms