RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 MMP1P03956 469 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 FDX1P10109 184 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ETF1P62495 437 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 SPP2Q13103 211 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 SUSD4Q5VX71 490 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 RAB42Q8N4Z0 105 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF302Q9NR11 478 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 MAST1Q9Y2H9 1570 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 KBTBD13C9JR72 458 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 IFNAR1P17181 557 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 CCNE1P24864 410 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ASNSD1Q9NWL6 643 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 LCMT1Q9UIC8 334 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 GDAQ9Y2T3 454 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP1R12AO14974 1030 aaPredicted RBP11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 COBLO75128 1261 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 GPC3P51654 580 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 HSP90AA5PQ58FG0 334 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 TTC39CQ8N584 583 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 EFHBQ8N7U6 833 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 TEKT4Q8WW24 435 aa11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 DDX50Q9BQ39 737 aaKnown RBP11.33□□□□□ -0.59
SRGAP3-207ENST00000485983 IFNAR2P48551 515 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 CACNB3P54284 484 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SLMAPQ14BN4 828 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 NEUROG2Q9H2A3 272 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 ZFYVE16Q7Z3T8 1539 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 ABCB11O95342 1321 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 IQANK1A0A1B0GTG1 560 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 GRIN3BO60391 1043 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 CYBBP04839 570 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 OCM2P0CE71 109 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 OCMP0CE72 109 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 WASHC5Q12768 1159 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 CENPUQ71F23 418 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 PYROXD1Q8WU10 500 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 GPR101Q96P66 508 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SFMBT1Q9UHJ3 866 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TJP3O95049 919 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SERPING1P05155 500 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 RALAP11233 206 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 PLCG1P19174 1290 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SFNP31947 248 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 PRELPP51888 382 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SYNDIG1Q9H7V2 258 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
SRGAP3-207ENST00000485983 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 SH2B2O14492 632 aaPredicted RBP11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZBTB41Q5SVQ8 909 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 TEX2Q8IWB9 1127 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 TUBB6Q9BUF5 446 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZBTB5O15062 677 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 CYP21A2P08686 494 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ESRRGP62508 458 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 RHPN2Q8IUC4 686 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 SPATA33Q96N06 139 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 CENPKQ9BS16 269 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ADAM22Q9P0K1 906 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 EXOC1LA0A1B0GW35 172 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 ZNF197O14709 1029 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 RWDD2BP57060 319 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 SERPINI1Q99574 410 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
SRGAP3-207ENST00000485983 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms