RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TRIM50Q86XT4 487 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 OR6J1Q8NGC5 347 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 DDX12PQ92771 950 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 C16orf70Q9BSU1 422 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 A6NJR5 290 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
SND1-212ENST00000485871 BACH1O14867 736 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 RHOBTB3O94955 611 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 HMGCRP04035 888 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 OATP04181 439 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 LGALS2P05162 132 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 GUCY2CP25092 1073 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 STAT5BP51692 787 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 NLRP12P59046 1061 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
SND1-212ENST00000485871 MAPK7Q13164 816 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 GIT2Q14161 759 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 TARBP2Q15633 366 aaKnown RBP12.59□□□□□ -0.39
SND1-212ENST00000485871 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 XKR3Q5GH77 459 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 FAM200AQ8TCP9 573 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
SND1-212ENST00000485871 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
SND1-212ENST00000485871 PDLIM7Q9NR12 457 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 SIP14410 1827 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 KAT6AQ92794 2004 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 EVPLQ92817 2033 aa12.59□□□□□ -0.39
SND1-212ENST00000485871 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 PVALEFA0A1B0GWK0 134 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 BIN1O00499 593 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 SEPT4O43236 478 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
SND1-212ENST00000485871 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 SMC2O95347 1197 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
SND1-212ENST00000485871 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
SND1-212ENST00000485871 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
SND1-212ENST00000485871 NPEPPSP55786 919 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 ASIC1P78348 528 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 ARHGEF6Q15052 776 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 STX1AQ16623 288 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 UTP14CQ5TAP6 766 aaKnown RBP12.58□□□□□ -0.4
SND1-212ENST00000485871 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
SND1-212ENST00000485871 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 DAW1Q8N136 415 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 KCND2Q9NZV8 630 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 PTCH2Q9Y6C5 1203 aa12.58□□□□□ -0.4
SND1-212ENST00000485871 ARHGEF35A5YM69 484 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 RSPH10B2B2RC85 870 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 ZBTB42B2RXF5 422 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
SND1-212ENST00000485871 RSPH10BP0C881 870 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 SLC26A2P50443 739 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 ZNF131P52739 623 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 GJA9P57773 515 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 COASYQ13057 564 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 ZNF658Q5TYW1 1059 aaPredicted RBP12.57□□□□□ -0.4
SND1-212ENST00000485871 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 BBXQ8WY36 941 aaPredicted RBP12.57□□□□□ -0.4
SND1-212ENST00000485871 SH2D3AQ9BRG2 576 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 SMARCAD1Q9H4L7 1026 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 XPNPEP1Q9NQW7 623 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 PCDHA2Q9Y5H9 948 aa12.57□□□□□ -0.4
SND1-212ENST00000485871 TRIP12Q14669 1992 aaPredicted RBP12.57□□□□□ -0.4
SND1-212ENST00000485871 TRIOBPQ9H2D6 2365 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 ESPNB1AK53 854 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 HAS3O00219 553 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 ADAMTS4O75173 837 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 F2P00734 622 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 INHAP05111 366 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
SND1-212ENST00000485871 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
SND1-212ENST00000485871 DGKDQ16760 1214 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 KIAA0895Q8NCT3 520 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 KAT2BQ92831 832 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms