RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 C4orf32Q8N8J7 132 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ENAHQ8N8S7 591 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SPATA4Q8NEY3 305 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 BCAS4Q8TDM0 211 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 NUDT8Q8WV74 236 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 RIN2Q8WYP3 895 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM11Q96F44 468 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM89AQ96GI7 184 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 DRC1Q96MC2 740 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ALS2CR12Q96Q35 445 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 BRIP1Q9BX63 1249 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 EDEM3Q9BZQ6 932 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 CCSER1Q9C0I3 900 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SAP130Q9H0E3 1048 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 BLZF1Q9H2G9 400 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 PLEKHA4Q9H4M7 779 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 NHEJ1Q9H9Q4 299 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 GDF3Q9NR23 364 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SH3GLB2Q9NR46 395 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 DISC1Q9NRI5 854 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 CNNM1Q9NRU3 951 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 EXOC1Q9NV70 894 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 KBTBD4Q9NVX7 518 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 CXXC1Q9P0U4 656 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 STIM2Q9P246 746 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 RNF14Q9UBS8 474 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 GDAQ9Y2T3 454 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SLC4A4Q9Y6R1 1079 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ABCA3Q99758 1704 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 ATP8B3O60423 1300 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 MYH2Q9UKX2 1941 aa5.19□□□□□ -1.58
SMARCC1-206ENST00000485737 SETD1BQ9UPS6 1966 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 SLIT2O94813 1529 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CACNA1SQ13698 1873 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 KIAA1551Q9HCM1 1747 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 GRID2IPA4D2P6 1211 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 B4DLN1 442 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RBAK-RBAKDNI3L0D1 243 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 LAD1O00515 517 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF263O14978 683 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 MEFVO15553 781 aaPredicted RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 KIF1CO43896 1103 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ORC4O43929 436 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PDE8AO60658 829 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 USO1O60763 962 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 HSF2BPO75031 334 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PLEKHA8P1O95397 391 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 MYBP10242 640 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RARAP10276 462 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 SCG2P13521 617 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CCNE1P24864 410 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CALML3P27482 149 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PRPHP41219 470 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 STAT6P42226 847 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 LIG3P49916 1009 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PMS1P54277 932 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 NAP1L1P55209 391 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PAK2Q13177 524 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 SPA17Q15506 151 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF174Q15697 407 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RRP12Q5JTH9 1297 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 MIIPQ5JXC2 388 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 LRIG3Q6UXM1 1119 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CAPN12Q6ZSI9 719 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 TAX1BP1Q86VP1 789 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 TEX2Q8IWB9 1127 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 IQCKQ8N0W5 287 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RNF10Q8N5U6 811 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 DAGLBQ8NCG7 672 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ZCRB1Q8TBF4 217 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 NUP133Q8WUM0 1156 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 P2RX5Q93086 422 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RRP36Q96EU6 259 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CABS1Q96KC9 395 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CAPZA3Q96KX2 299 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PSMG3-AS1Q96PY0 264 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 OSBPL9Q96SU4 736 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 MDFIQ99750 246 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 DUSP9Q99956 384 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ZKSCAN3Q9BRR0 538 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 EPN3Q9H201 632 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 VCPKMTQ9H867 229 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 JPH1Q9HDC5 661 aaPredicted RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 INCENPQ9NQS7 918 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 DNAJB12Q9NXW2 375 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 SLC6A14Q9UN76 642 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 PLAGL2Q9UPG8 496 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 RTCBQ9Y3I0 505 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 STARD13Q9Y3M8 1113 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CAPN6Q9Y6Q1 641 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 A0A1B0GUL6 1792 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF804BA4D1E1 1349 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 FLT1P17948 1338 aa5.18□□□□□ -1.58
SMARCC1-206ENST00000485737 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 SSU72P8A0A1W2PR75 194 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM49BA6NDI0 452 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms