RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 FBXO16Q8IX29 292 aaPredicted RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 DHX37Q8IY37 1157 aaKnown RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 MYOCDQ8IZQ8 938 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 MYCT1Q8N699 235 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 MORC4Q8TE76 937 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 SEPT1Q8WYJ6 367 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 P2RX5Q93086 422 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 MRFAP1L1Q96HT8 127 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 FGD4Q96M96 766 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 VTA1Q9NP79 307 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 TBC1D7Q9P0N9 293 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 IFNKQ9P0W0 207 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 SEL1LQ9UBV2 794 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 DIS3Q9Y2L1 958 aaKnown RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 ZBTB39O15060 712 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 COBLO75128 1261 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 TPM2P07951 284 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
CTSA-208ENST00000485627 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 CDC25BP30305 580 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 RARRES1P49788 294 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 EHHADHQ08426 723 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 UGCGQ16739 394 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 HSP90AA4PQ58FG1 418 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 FAM114A1Q8IWE2 563 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 KIAA0895Q8NCT3 520 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 HPS3Q969F9 1004 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 CEP170P1Q96L14 293 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
CTSA-208ENST00000485627 PARVGQ9HBI0 331 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 SAMSN1Q9NSI8 373 aaKnown RBP10.55□□□□□ -0.72
CTSA-208ENST00000485627 DDX41Q9UJV9 622 aaKnown RBP10.55□□□□□ -0.72
CTSA-208ENST00000485627 ADGRA2Q96PE1 1338 aa10.55□□□□□ -0.72
CTSA-208ENST00000485627 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 USO1O60763 962 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 FKTNO75072 461 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 HIP1RO75146 1068 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 FARP2O94887 1054 aaPredicted RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 ATG7O95352 703 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 GCNT3O95395 438 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 ZNF18P17022 549 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 TM4SF4P48230 202 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 PRKCEQ02156 737 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 LRRC63Q05C16 580 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 LRRC41Q15345 812 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 HS1BP3Q53T59 392 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 XKR3Q5GH77 459 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 CELF3Q5SZQ8 465 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 UTP14CQ5TAP6 766 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 CENPPQ6IPU0 288 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 C17orf99Q6UX52 265 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 FAM178BQ8IXR5 827 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 MSL3Q8N5Y2 521 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 SRRTQ9BXP5 876 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 THAP9Q9H5L6 903 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 NRBP2Q9NSY0 501 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 LARSQ9P2J5 1176 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 TRIM17Q9Y577 477 aa10.54□□□□□ -0.72
CTSA-208ENST00000485627 KIAA0100Q14667 2235 aaKnown RBP10.54□□□□□ -0.72
CTSA-208ENST00000485627 TRIM49BA6NDI0 452 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 KCNJ18B7U540 433 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 CALUO43852 315 aaPredicted RBP10.53□□□□□ -0.72
CTSA-208ENST00000485627 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 CAP1Q01518 475 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 CRHR2Q13324 411 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 KCNJ12Q14500 433 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 ODR4Q5SWX8 454 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 CDKAL1Q5VV42 579 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 PLA2G4FQ68DD2 849 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 TTI2Q6NXR4 508 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 MAMDC4Q6UXC1 1216 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 MAEAQ7L5Y9 396 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 NELFCDQ8IXH7 590 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 GLG1Q92896 1179 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 FAM167AQ96KS9 214 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms