RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 ZNF213O14771 459 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 TLR3O15455 904 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 PCP11498 1178 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 FOSL2P15408 326 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 EDNRBP24530 442 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 CCL23P55773 120 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 RPS6P62753 249 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 PPIGQ13427 754 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 DUSP28Q4G0W2 176 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 ENAHQ8N8S7 591 aaPredicted RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 USP38Q8NB14 1042 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 WDR19Q8NEZ3 1342 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 TBC1D5Q92609 795 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 ESR2Q92731 530 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 COPS5Q92905 334 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 NOC4LQ9BVI4 516 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 PBX4Q9BYU1 374 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 TSPAN10Q9H1Z9 355 aaPredicted RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 HIPK3Q9H422 1215 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 RNF41Q9H4P4 317 aaPredicted RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 TRMT13Q9NUP7 481 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 COL20A1Q9P218 1284 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 ADD3Q9UEY8 706 aaKnown RBP8.67□□□□□ -1.02
CLRN1-206ENST00000485607 SLC6A14Q9UN76 642 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 LAMA4Q16363 1823 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 RGS9O75916 674 aaPredicted RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 CABYRO75952 493 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 ARIH2O95376 493 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 MYL3P08590 195 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 CYP2C9P11712 490 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 GSPT1P15170 499 aaKnown RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 PURAQ00577 322 aaKnown RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 TYRO3Q06418 890 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 AAMPQ13685 434 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 CDC37Q16543 378 aaPredicted RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 DGKHQ86XP1 1220 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 TMEM199Q8N511 208 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 TIFAQ96CG3 184 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 SCLYQ96I15 445 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 ALDH8A1Q9H2A2 487 aaPredicted RBP8.66□□□□□ -1.02
CLRN1-206ENST00000485607 IL23AQ9NPF7 189 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 Q9Y3F1 56 aa8.66□□□□□ -1.02
CLRN1-206ENST00000485607 TNKSO95271 1327 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 TMEM265A0A087WTH1 108 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ZEB2O60315 1214 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
CLRN1-206ENST00000485607 PPP2R5BQ15173 497 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 QRICH1Q2TAL8 776 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
CLRN1-206ENST00000485607 PSRC1Q6PGN9 363 aaPredicted RBP8.65□□□□□ -1.02
CLRN1-206ENST00000485607 OTOP2Q7RTS6 562 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ADGRF4Q8IZF3 695 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 OR6J1Q8NGC5 347 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ANKS1AQ92625 1134 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 DSCC1Q9BVC3 393 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 KAT14Q9H8E8 782 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 ZSWIM5Q9P217 1185 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 YBX2Q9Y2T7 364 aaKnown RBP8.65□□□□□ -1.02
CLRN1-206ENST00000485607 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
CLRN1-206ENST00000485607 TAF6LQ9Y6J9 622 aa8.65□□□□□ -1.02
CLRN1-206ENST00000485607 LOC102724159A0A0B4J2E5 919 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 OPLAHO14841 1288 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 PPP1R11O60927 126 aaPredicted RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 TXNP10599 105 aaKnown RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 CPT1AP50416 773 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 PWP2Q15269 919 aaKnown RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 IMMTQ16891 758 aaKnown RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 SLC35G1Q2M3R5 365 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 FAM47CQ5HY64 1035 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 CCDC62Q6P9F0 684 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 CYB5R4Q7L1T6 521 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 IQCA1Q86XH1 822 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 STAG2Q8N3U4 1231 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 HERVK_113Q902F9 699 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 TAAR1Q96RJ0 339 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 MTG1Q9BT17 334 aaPredicted RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 PRDM12Q9H4Q4 367 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 ALG2Q9H553 416 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 VAT1LQ9HCJ6 419 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
CLRN1-206ENST00000485607 MUC3AQ02505 3323 aa8.64□□□□□ -1.03
CLRN1-206ENST00000485607 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
CLRN1-206ENST00000485607 ABCB11O95342 1321 aa8.63□□□□□ -1.03
CLRN1-206ENST00000485607 A6NJR5 290 aa8.63□□□□□ -1.03
CLRN1-206ENST00000485607 HIP1O00291 1037 aa8.63□□□□□ -1.03
CLRN1-206ENST00000485607 DHX16O60231 1041 aaKnown RBP8.63□□□□□ -1.03
CLRN1-206ENST00000485607 FGBP02675 491 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms