RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PLA2G4FQ68DD2 849 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 SERINC5Q86VE9 423 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 KCTD17Q8N5Z5 321 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 NACC1Q96RE7 527 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 NT5C3AQ9H0P0 336 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 PDLIM7Q9NR12 457 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 PCDHA7Q9UN72 937 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 PPME1Q9Y570 386 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 LTBP2Q14767 1821 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 C22orf31O95567 290 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 PTK7Q13308 1070 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 MTERF2Q49AM1 385 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 SPECC1Q5M775 1068 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 C7orf61Q8IZ16 206 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 SYMPKQ92797 1274 aaKnown RBP22.25■■□□□ 1.15
COL6A2-208ENST00000485591 EPSTI1Q96J88 318 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 PNMA5Q96PV4 448 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 CEP89Q96ST8 783 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 CYP26B1Q9NR63 512 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 DDX19AQ9NUU7 478 aaKnown RBP22.25■■□□□ 1.15
COL6A2-208ENST00000485591 DBR1Q9UK59 544 aaKnown RBP22.25■■□□□ 1.15
COL6A2-208ENST00000485591 TBX21Q9UL17 535 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 KIAA1024Q9UPX6 916 aa22.25■■□□□ 1.15
COL6A2-208ENST00000485591 MKI67P46013 3256 aaKnown RBP22.24■■□□□ 1.15
COL6A2-208ENST00000485591 ZBTB39O15060 712 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 TXLNAP40222 546 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 GRB10Q13322 594 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 TMEM119Q4V9L6 283 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 TAF2Q6P1X5 1199 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 USP49Q70CQ1 688 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 PIGOQ8TEQ8 1089 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 DPF3Q92784 378 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 CALML4Q96GE6 196 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 CDK5RAP3Q96JB5 506 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 CEP170P1Q96L14 293 aa22.24■■□□□ 1.15
COL6A2-208ENST00000485591 MAGEB2O15479 319 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 CYP2C9P11712 490 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 KLRC1P26715 233 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 RARRES1P49788 294 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 NPEPPSP55786 919 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 TBC1D8BQ0IIM8 1120 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 XKR9Q5GH70 373 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 SHC4Q6S5L8 630 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 DHX38Q92620 1227 aaKnown RBP22.23■■□□□ 1.15
COL6A2-208ENST00000485591 SH2D3AQ9BRG2 576 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 GDPD2Q9HCC8 539 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 TMEM39AQ9NV64 488 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 PCDHA2Q9Y5H9 948 aa22.23■■□□□ 1.15
COL6A2-208ENST00000485591 SIP14410 1827 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 DNAH12Q6ZR08 3092 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 RBL2Q08999 1139 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 KARSQ15046 597 aaKnown RBP22.22■■□□□ 1.15
COL6A2-208ENST00000485591 ZRSR1Q15695 479 aaKnown RBP22.22■■□□□ 1.15
COL6A2-208ENST00000485591 CCDC155Q8N6L0 562 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 RASSF8Q8NHQ8 419 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 ZBTB10Q96DT7 871 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 CCDC43Q96MW1 224 aaKnown RBP22.22■■□□□ 1.15
COL6A2-208ENST00000485591 CCDC39Q9UFE4 941 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 DNM3Q9UQ16 869 aa22.22■■□□□ 1.15
COL6A2-208ENST00000485591 A0A087WWV3 80 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 SMIM35A0A1B0GVV1 85 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 MAFO75444 373 aaPredicted RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 RPLP2P05387 115 aaKnown RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 RFC5P40937 340 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 TRIM71Q2Q1W2 868 aaKnown RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 ADALQ6DHV7 355 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 RUFY4Q6ZNE9 571 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 KCNK18Q7Z418 384 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 SH3RF1Q7Z6J0 888 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 RPAINQ86UA6 219 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 EXOC8Q8IYI6 725 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 CAGE1Q8TC20 777 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 WNT8BQ93098 351 aa22.21■■□□□ 1.15
COL6A2-208ENST00000485591 JPH2Q9BR39 696 aaPredicted RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 NOC4LQ9BVI4 516 aaKnown RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 DHX33Q9H6R0 707 aaKnown RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 PRDM5Q9NQX1 630 aaPredicted RBP22.21■■□□□ 1.15
COL6A2-208ENST00000485591 IGKV6-21A0A0C4DH24 114 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 E9PMD0 336 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 PITPNM1O00562 1244 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 CAND2O75155 1236 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 EYA4O95677 639 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 PLCG1P19174 1290 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 POLGP54098 1239 aaPredicted RBP22.2■■□□□ 1.14
COL6A2-208ENST00000485591 BFSP2Q13515 415 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 RESP18Q5W5W9 173 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 LINC01465Q8N7H1 131 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 RETREG2Q8NC44 543 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 SLC7A3Q8WY07 619 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 PLIN2Q99541 437 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 BHMT2Q9H2M3 363 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 HIPK3Q9H422 1215 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 PRKAG2Q9UGJ0 569 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 NR2E3Q9Y5X4 410 aa22.2■■□□□ 1.14
COL6A2-208ENST00000485591 ARHGEF35A5YM69 484 aa22.19■■□□□ 1.14
COL6A2-208ENST00000485591 TRIM43BA6NCK2 446 aa22.19■■□□□ 1.14
COL6A2-208ENST00000485591 DGAT1O75907 488 aa22.19■■□□□ 1.14
COL6A2-208ENST00000485591 MLLT1Q03111 559 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms