RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CCND3P30281 292 aaPredicted RBP16.17■□□□□ 0.18
LRIF1-202ENST00000485275 C16orf70Q9BSU1 422 aa16.17■□□□□ 0.18
LRIF1-202ENST00000485275 CBX8Q9HC52 389 aa16.17■□□□□ 0.18
LRIF1-202ENST00000485275 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
LRIF1-202ENST00000485275 PCDHA2Q9Y5H9 948 aa16.17■□□□□ 0.18
LRIF1-202ENST00000485275 PVALEFA0A1B0GWK0 134 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 DYNC1LI2O43237 492 aaPredicted RBP16.16■□□□□ 0.18
LRIF1-202ENST00000485275 ADCY3O60266 1144 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
LRIF1-202ENST00000485275 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
LRIF1-202ENST00000485275 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 MAP3K21Q5TCX8 1036 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 ZNF658Q5TYW1 1059 aaPredicted RBP16.16■□□□□ 0.18
LRIF1-202ENST00000485275 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 NRBP1Q9UHY1 535 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
LRIF1-202ENST00000485275 A6NJR5 290 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PPP1R3GB7ZBB8 358 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 AKR1A1P14550 325 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 GUCY2CP25092 1073 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 SOX10P56693 466 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 IQCB1Q15051 598 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PLCB4Q15147 1175 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 TARBP2Q15633 366 aaKnown RBP16.15■□□□□ 0.18
LRIF1-202ENST00000485275 MTERF2Q49AM1 385 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 FAM160B1Q5W0V3 765 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 MAEAQ7L5Y9 396 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
LRIF1-202ENST00000485275 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 GLG1Q92896 1179 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 EXOC1Q9NV70 894 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PANK4Q9NVE7 773 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 FRMPD3Q5JV73 1810 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 GNRH1P01148 92 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
LRIF1-202ENST00000485275 HOXD10P28358 340 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 ZNF165P49910 485 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 CASP5P51878 434 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 SFR1Q86XK3 245 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 NIFKQ9BYG3 293 aaKnown RBP16.15■□□□□ 0.18
LRIF1-202ENST00000485275 RNPEPQ9H4A4 650 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 AZI2Q9H6S1 392 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 SLC39A2Q9NP94 309 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
LRIF1-202ENST00000485275 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
LRIF1-202ENST00000485275 HIP1RO75146 1068 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 HMGCRP04035 888 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 PRCPP42785 496 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 ZNF131P52739 623 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 BEX3Q00994 111 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 NCAPHQ15003 741 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
LRIF1-202ENST00000485275 RAET1EQ8TD07 263 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 ATP8B4Q8TF62 1192 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 ZBTB10Q96DT7 871 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 KCND2Q9NZV8 630 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 TRIM17Q9Y577 477 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
LRIF1-202ENST00000485275 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 SEPT4O43236 478 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 MLKLQ8NB16 471 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 PXYLP1Q8TE99 480 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 TRAPPC12Q8WVT3 735 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 KAT2BQ92831 832 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 SMARCAD1Q9H4L7 1026 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
LRIF1-202ENST00000485275 PMS1P54277 932 aaKnown RBP16.13■□□□□ 0.17
LRIF1-202ENST00000485275 LRRC41Q15345 812 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 OTUD6AQ7L8S5 288 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 CCDC65Q8IXS2 484 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 PPP1R13LQ8WUF5 828 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
LRIF1-202ENST00000485275 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 HSD3B7Q9H2F3 369 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 ZHX3Q9H4I2 956 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
LRIF1-202ENST00000485275 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms