RNA–Protein interactions for RNA: ENST00000485180.1

USP9X-207, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-207ENST00000485180 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
USP9X-207ENST00000485180 OPA1O60313 960 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 INSRRP14616 1297 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 RRADP55042 308 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 CD83Q01151 205 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 TMEM200BQ69YZ2 307 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
USP9X-207ENST00000485180 CHST14Q8NCH0 376 aa11.18□□□□□ -0.62
USP9X-207ENST00000485180 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 GOLGA6L22H0YM25 854 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 HMGCRP04035 888 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 KCNQ1P51787 676 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 ZNF460Q14592 562 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 EIF4HQ15056 248 aaKnown RBP11.17□□□□□ -0.62
USP9X-207ENST00000485180 WDR48Q8TAF3 677 aa11.17□□□□□ -0.62
USP9X-207ENST00000485180 NEIL1Q96FI4 390 aaPredicted RBP11.17□□□□□ -0.62
USP9X-207ENST00000485180 RFPL3O75679 317 aa11.16□□□□□ -0.62
USP9X-207ENST00000485180 ASMTLO95671 621 aa11.16□□□□□ -0.62
USP9X-207ENST00000485180 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
USP9X-207ENST00000485180 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
USP9X-207ENST00000485180 LRRC37BQ96QE4 947 aa11.16□□□□□ -0.62
USP9X-207ENST00000485180 A0A0G2JNJ9 132 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 KRT37O76014 449 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 SDSP20132 328 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 LARP4Q71RC2 724 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP9X-207ENST00000485180 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.62
USP9X-207ENST00000485180 CALML6Q8TD86 181 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 GNRHR2Q96P88 292 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 Q9UFV3 132 aa11.15□□□□□ -0.62
USP9X-207ENST00000485180 TRAF5O00463 557 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 FNTBP49356 437 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 RAC3P60763 192 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 PABPC4Q13310 644 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP9X-207ENST00000485180 MOGSQ13724 837 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 TRIM68Q6AZZ1 485 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 SYNPOQ8N3V7 929 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 FOXRED1Q96CU9 486 aaPredicted RBP11.14□□□□□ -0.63
USP9X-207ENST00000485180 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 CDC42EP3Q9UKI2 254 aa11.14□□□□□ -0.63
USP9X-207ENST00000485180 DVL2O14641 736 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
USP9X-207ENST00000485180 KIF11P52732 1056 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 ALDH6A1Q02252 535 aaKnown RBP11.13□□□□□ -0.63
USP9X-207ENST00000485180 NFYCQ13952 458 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 PUM1Q14671 1186 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP9X-207ENST00000485180 CDSNQ15517 529 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 PIK3R6Q5UE93 754 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 GRAMD4Q6IC98 578 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 TCTN3Q6NUS6 607 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 Q8TCH9 128 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
USP9X-207ENST00000485180 RNPC3Q96LT9 517 aaKnown RBP11.13□□□□□ -0.63
USP9X-207ENST00000485180 WWC2-AS2Q96NR7 200 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 CABP5Q9NP86 173 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
USP9X-207ENST00000485180 ZNF585AQ6P3V2 769 aa11.12□□□□□ -0.63
USP9X-207ENST00000485180 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
USP9X-207ENST00000485180 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
USP9X-207ENST00000485180 FOXB1Q99853 325 aa11.12□□□□□ -0.63
USP9X-207ENST00000485180 DEF6Q9H4E7 631 aa11.12□□□□□ -0.63
USP9X-207ENST00000485180 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 FOXS1O43638 330 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 ZNF623O75123 536 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 JMJD7P0C870 316 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
USP9X-207ENST00000485180 FLT3P36888 993 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 TBR1Q16650 682 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 AGBL4Q5VU57 503 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
USP9X-207ENST00000485180 CDK5RAP1Q96SZ6 601 aaKnown RBP11.11□□□□□ -0.63
USP9X-207ENST00000485180 OAZ3Q9UMX2 235 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
USP9X-207ENST00000485180 ARHGAP6O43182 974 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 SELENOPP49908 381 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 NOLC1Q14978 699 aaKnown RBP eCLIP11.1□□□□□ -0.63
USP9X-207ENST00000485180 PCOLCEQ15113 449 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 TCEA2Q15560 299 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
USP9X-207ENST00000485180 B4GALT6Q9UBX8 382 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
USP9X-207ENST00000485180 TCAF1Q9Y4C2 921 aa11.1□□□□□ -0.63
USP9X-207ENST00000485180 CBX4O00257 560 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 MATN2O00339 956 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 CR2P20023 1033 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
USP9X-207ENST00000485180 USP30Q70CQ3 517 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 UBE2R2Q712K3 238 aaPredicted RBP11.09□□□□□ -0.63
USP9X-207ENST00000485180 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 E2F7Q96AV8 911 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 ACSS2Q9NR19 701 aa11.09□□□□□ -0.63
USP9X-207ENST00000485180 INTS7Q9NVH2 962 aaKnown RBP11.09□□□□□ -0.63
USP9X-207ENST00000485180 H7C1D1 291 aa11.08□□□□□ -0.64
USP9X-207ENST00000485180 MATN3O15232 486 aa11.08□□□□□ -0.64
USP9X-207ENST00000485180 PRLP01236 227 aa11.08□□□□□ -0.64
USP9X-207ENST00000485180 TNFRSF1AP19438 455 aa11.08□□□□□ -0.64
USP9X-207ENST00000485180 RANGAP1P46060 587 aaPredicted RBP11.08□□□□□ -0.64
USP9X-207ENST00000485180 R3HDM1Q15032 1099 aaKnown RBP11.08□□□□□ -0.64
USP9X-207ENST00000485180 HOMER1Q86YM7 354 aa11.08□□□□□ -0.64
USP9X-207ENST00000485180 RTKN2Q8IZC4 609 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms