RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 C22orf31O95567 290 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 CXCL10P02778 98 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 RPA1P27694 616 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 CTTNQ14247 550 aaKnown RBP20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 IL17AQ16552 155 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 TMEM240Q5SV17 173 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 TRMT1LQ7Z2T5 733 aaKnown RBP20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 TPH2Q8IWU9 490 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 EXOC8Q8IYI6 725 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 KIAA0319LQ8IZA0 1049 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 TDHQ8IZJ6 230 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 ERMNQ8TAM6 284 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 LRWD1Q9UFC0 647 aa20.27■□□□□ 0.84
CNKSR1-208ENST00000484874 FGBP02675 491 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 IER5Q5VY09 327 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 PSRC1Q6PGN9 363 aaPredicted RBP20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 CATSPER3Q86XQ3 398 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 ANKEF1Q9NU02 776 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 MORC2Q9Y6X9 1032 aaPredicted RBP20.26■□□□□ 0.83
CNKSR1-208ENST00000484874 IGKV6-21A0A0C4DH24 114 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 CHRNA1P02708 482 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 ZSCAN22P10073 491 aaPredicted RBP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 TMOD1P28289 359 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 YWHABP31946 246 aaKnown RBP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 CYP4A11Q02928 519 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 MGAT3Q09327 533 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 SF3A1Q15459 793 aaKnown RBP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 SHHQ15465 462 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 EFCAB12Q6NXP0 572 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 ZNF365Q70YC5 407 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 LINC01465Q8N7H1 131 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 JPH2Q9BR39 696 aaPredicted RBP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 CYP26B1Q9NR63 512 aa20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
CNKSR1-208ENST00000484874 RANBP2P49792 3224 aaKnown RBP20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 NBNO60934 754 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 MAFO75444 373 aaPredicted RBP20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 ACRP10323 421 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 TBC1D8BQ0IIM8 1120 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 MBTPS1Q14703 1052 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 HAUS3Q68CZ6 603 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 KCTD17Q8N5Z5 321 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 HERVK_113Q902F9 699 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 ZBTB10Q96DT7 871 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 NACC1Q96RE7 527 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 KDM3AQ9Y4C1 1321 aa20.24■□□□□ 0.83
CNKSR1-208ENST00000484874 MED24O75448 989 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 PTPAQ15257 358 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 C9orf50Q5SZB4 431 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 RASIP1Q5U651 963 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 DEFB128Q7Z7B8 93 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 METTL13Q8N6R0 699 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 EVPLQ92817 2033 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 CEP170P1Q96L14 293 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 AK8Q96MA6 479 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 CELF4Q9BZC1 486 aaKnown RBP20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 FAM49AQ9H0Q0 323 aaPredicted RBP20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 CLIC4Q9Y696 253 aa20.23■□□□□ 0.83
CNKSR1-208ENST00000484874 TMEM150BA6NC51 233 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 ZBTB39O15060 712 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 SLC26A4O43511 780 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 ACTN1P12814 892 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 RFC5P40937 340 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 DNM2P50570 870 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 NPEPPSP55786 919 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 PLEKHG4Q58EX7 1191 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 HABP4Q5JVS0 413 aaKnown RBP20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 ATL3Q6DD88 541 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 FTOQ9C0B1 505 aaKnown RBP eCLIP20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 MTIF3Q9H2K0 278 aaKnown RBP20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 DHX33Q9H6R0 707 aaKnown RBP20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 DBR1Q9UK59 544 aaKnown RBP20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 CDY2AQ9Y6F7 541 aa20.22■□□□□ 0.83
CNKSR1-208ENST00000484874 M0QZ92 97 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 GAS2O43903 313 aaKnown RBP20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 F13A1P00488 732 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 SLC39A14Q15043 492 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 XKR9Q5GH70 373 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 PLA2G4FQ68DD2 849 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 CNKSR3Q6P9H4 555 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 SUGCTQ9HAC7 445 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 TRPV2Q9Y5S1 764 aa20.21■□□□□ 0.83
CNKSR1-208ENST00000484874 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
CNKSR1-208ENST00000484874 VWA3AA6NCI4 1184 aa20.2■□□□□ 0.82
CNKSR1-208ENST00000484874 GPR32O75388 356 aa20.2■□□□□ 0.82
CNKSR1-208ENST00000484874 BAIAP3O94812 1187 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms