RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 GPC5P78333 572 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 SIM1P81133 766 aaPredicted RBP4.45□□□□□ -1.7
CAPN8-210ENST00000484873 SRSF5Q13243 272 aaKnown RBP4.45□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF423Q2M1K9 1284 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 TWISTNBQ3B726 338 aaPredicted RBP4.45□□□□□ -1.7
CAPN8-210ENST00000484873 FAM26DQ5JW98 314 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 KANK3Q6NY19 840 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 PI16Q6UXB8 463 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF852Q6ZMS4 543 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 KRT25Q7Z3Z0 450 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 ADGRA1Q86SQ6 560 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 CLEC10AQ8IUN9 316 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 CHCHD4Q8N4Q1 142 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 COLGALT1Q8NBJ5 622 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 DEFB124Q8NES8 71 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 MDM1Q8TC05 714 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 CCDC17Q96LX7 622 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 FTHL17Q9BXU8 183 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 OSBPL7Q9BZF2 842 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 CHRDQ9H2X0 955 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 TMEM9BQ9NQ34 198 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 TCP11L1Q9NUJ3 509 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.45□□□□□ -1.7
CAPN8-210ENST00000484873 DDX41Q9UJV9 622 aaKnown RBP4.45□□□□□ -1.7
CAPN8-210ENST00000484873 LRFN2Q9ULH4 789 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 NUMBLQ9Y6R0 609 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 IL16Q14005 1332 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 FREM2Q5SZK8 3169 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 C2CD3Q4AC94 2353 aa4.45□□□□□ -1.7
CAPN8-210ENST00000484873 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 CHURC1-FNTBB4DL54 471 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 SLC28A2O43868 658 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 GHRP10912 638 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 LAMP2P13473 410 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 AKR1B1P15121 316 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 CD72P21854 359 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF76P36508 570 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 IL15P40933 162 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FNTBP49356 437 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FOXK1P85037 733 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 HTR4Q13639 388 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 GIT2Q14161 759 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FOXD4L5Q5VV16 416 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 TCEAL6Q6IPX3 200 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 CYP26C1Q6V0L0 522 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 NSMFQ6X4W1 530 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 TPRG1Q6ZUI0 275 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 CACNA2D4Q7Z3S7 1137 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 RAB44Q7Z6P3 723 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 PPFIBP1Q86W92 1011 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF710Q8N1W2 664 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 PIP4K2CQ8TBX8 421 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FOXD4L4Q8WXT5 416 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 TCEAL3Q969E4 200 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 XAGE2Q96GT9 111 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FCRL3Q96P31 734 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 NUP88Q99567 741 aaPredicted RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 SMOC1Q9H4F8 434 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 PRORYQ9H606 182 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 EHMT1Q9H9B1 1298 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 WDR6Q9NNW5 1121 aaKnown RBP4.44□□□□□ -1.7
CAPN8-210ENST00000484873 IL17BQ9UHF5 180 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 FEM1BQ9UK73 627 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 AKAP2Q9Y2D5 859 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 CLUHO75153 1309 aa4.44□□□□□ -1.7
CAPN8-210ENST00000484873 PLXNA4Q9HCM2 1894 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 SPAARA0A1B0GVQ0 90 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 LNP1A1A4G5 178 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 TBKBP1A7MCY6 615 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ERVH48-1M5A8F1 160 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF286BP0CG31 522 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 GNAT1P11488 350 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ALAS1P13196 640 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 SCG2P13521 617 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 EPCAMP16422 314 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ARID4AP29374 1257 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 HOXC8P31273 242 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 RFX5P48382 616 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ALDH7A1P49419 539 aaKnown RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 TIMM10P62072 90 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 DYNLL1P63167 89 aaKnown RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ARHGAP1Q07960 439 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 FZD5Q13467 585 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 TAF1BQ53T94 588 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 GORABQ5T7V8 394 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 PDXDC2PQ6P474 469 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 CCNI2Q6ZMN8 369 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 ZNF574Q6ZN55 896 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 CHST3Q7LGC8 479 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 RPAP2Q8IXW5 612 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 CCDC146Q8IYE0 955 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 PPTC7Q8NI37 304 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 EMID1Q96A84 441 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 LIN37Q96GY3 246 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 PHF12Q96QT6 1004 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 TMUB1Q9BVT8 246 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 RHOBTB2Q9BYZ6 727 aa4.43□□□□□ -1.7
CAPN8-210ENST00000484873 GZF1Q9H116 711 aaPredicted RBP4.43□□□□□ -1.7
CAPN8-210ENST00000484873 PCDHB7Q9Y5E2 793 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms