RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PPFIBP1Q86W92 1011 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 FGD4Q96M96 766 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 GABBR1Q9UBS5 961 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 MYH11P35749 1972 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 CALUO43852 315 aaPredicted RBP28.95■■■□□ 2.23
SHOX2-204ENST00000483851 HIP1RO75146 1068 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 GCNT3O95395 438 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 SUPT20HL2P0C7V6 817 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 CASP5P51878 434 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 SP2Q02086 613 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 MAPK7Q13164 816 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 NELFCDQ8IXH7 590 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 FAM178BQ8IXR5 827 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 TMX1Q9H3N1 280 aa28.95■■■□□ 2.23
SHOX2-204ENST00000483851 TYW1Q9NV66 732 aaKnown RBP28.95■■■□□ 2.23
SHOX2-204ENST00000483851 ASB14A6NK59 587 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 TPM1P09493 284 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 PRKCSHP14314 528 aaPredicted RBP28.95■■■□□ 2.22
SHOX2-204ENST00000483851 NYAP1Q6ZVC0 841 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 ZNF720Q7Z2F6 126 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 SLC17A8Q8NDX2 589 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 DRC1Q96MC2 740 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 FIZ1Q96SL8 496 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 ZCCHC17Q9NP64 241 aaKnown RBP28.95■■■□□ 2.22
SHOX2-204ENST00000483851 PCDHB13Q9Y5F0 798 aa28.95■■■□□ 2.22
SHOX2-204ENST00000483851 IGSF9BQ9UPX0 1349 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 USP27XA6NNY8 438 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 NFIL3Q16649 462 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 MAN2A1Q16706 1144 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 ODR4Q5SWX8 454 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 C16orf45Q96MC5 204 aaPredicted RBP28.94■■■□□ 2.22
SHOX2-204ENST00000483851 NOC4LQ9BVI4 516 aaKnown RBP28.94■■■□□ 2.22
SHOX2-204ENST00000483851 PORCNQ9H237 461 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 R3HDMLQ9H3Y0 253 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 DOCK5Q9H7D0 1870 aa28.94■■■□□ 2.22
SHOX2-204ENST00000483851 PGK2P07205 417 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 MYBP10242 640 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 UBA1P22314 1058 aaKnown RBP28.93■■■□□ 2.22
SHOX2-204ENST00000483851 HUNKP57058 714 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 XKR9Q5GH70 373 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 SWSAP1Q6NVH7 229 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 DAW1Q8N136 415 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 CCAR2Q8N163 923 aaKnown RBP28.93■■■□□ 2.22
SHOX2-204ENST00000483851 CCDC51Q96ER9 411 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 SFI1A8K8P3 1242 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 AKR1B15C9JRZ8 316 aaPredicted RBP28.93■■■□□ 2.22
SHOX2-204ENST00000483851 CETN3O15182 167 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 TNNT1P13805 278 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 WDR78Q5VTH9 848 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 ANO5Q75V66 913 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 CYFIP1Q7L576 1253 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 TC2NQ8N9U0 490 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 IQCDQ96DY2 449 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 PANX2Q96RD6 677 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 EFCC1Q9HA90 598 aa28.93■■■□□ 2.22
SHOX2-204ENST00000483851 SYNGAP1Q96PV0 1343 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 IGKV6D-21A0A0A0MT36 114 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 STBD1O95210 358 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 RPL13P26373 211 aaKnown RBP28.92■■■□□ 2.22
SHOX2-204ENST00000483851 HOXD13P35453 343 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 MKRN3Q13064 507 aaKnown RBP28.92■■■□□ 2.22
SHOX2-204ENST00000483851 XKR3Q5GH77 459 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 MIIPQ5JXC2 388 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 CNGA4Q8IV77 575 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 ANKRD13CQ8N6S4 541 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 STRA6Q9BX79 667 aa28.92■■■□□ 2.22
SHOX2-204ENST00000483851 MAFBQ9Y5Q3 323 aaPredicted RBP28.92■■■□□ 2.22
SHOX2-204ENST00000483851 BACH1O14867 736 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 ZNF862O60290 1169 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 FARP2O94887 1054 aaPredicted RBP28.91■■■□□ 2.22
SHOX2-204ENST00000483851 PRPF6O94906 941 aaKnown RBP28.91■■■□□ 2.22
SHOX2-204ENST00000483851 PLS3P13797 630 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 ADAM9Q13443 819 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 VWA3BQ502W6 1294 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 FKBP15Q5T1M5 1219 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 METTL7BQ6UX53 244 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 CCDC60Q8IWA6 550 aaPredicted RBP28.91■■■□□ 2.22
SHOX2-204ENST00000483851 RETREG2Q8NC44 543 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 ERGIC2Q96RQ1 377 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 ST6GALNAC4Q9H4F1 302 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 BCAS3Q9H6U6 928 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 C17orf75Q9HAS0 396 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 MYH9P35579 1960 aaKnown RBP28.91■■■□□ 2.22
SHOX2-204ENST00000483851 RIOK3O14730 519 aaKnown RBP28.91■■■□□ 2.22
SHOX2-204ENST00000483851 TBC1D8BQ0IIM8 1120 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 FAM110CQ1W6H9 321 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 NUP58Q9BVL2 599 aa28.91■■■□□ 2.22
SHOX2-204ENST00000483851 STX10O60499 249 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 USO1O60763 962 aaKnown RBP28.9■■■□□ 2.22
SHOX2-204ENST00000483851 PTPN21Q16825 1174 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 ZNF467Q7Z7K2 595 aaPredicted RBP28.9■■■□□ 2.22
SHOX2-204ENST00000483851 GOLGA5Q8TBA6 731 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 EEF2KMTQ96G04 330 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 PTPN18Q99952 460 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 PLXNB2O15031 1838 aa28.9■■■□□ 2.22
SHOX2-204ENST00000483851 MANSC4A6NHS7 340 aaPredicted RBP28.89■■■□□ 2.22
SHOX2-204ENST00000483851 PPP1R37O75864 691 aa28.89■■■□□ 2.22
SHOX2-204ENST00000483851 NMT1P30419 496 aaKnown RBP28.89■■■□□ 2.22
SHOX2-204ENST00000483851 UTP14CQ5TAP6 766 aaKnown RBP28.89■■■□□ 2.22
SHOX2-204ENST00000483851 E4F1Q66K89 784 aaPredicted RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms