RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 SUSD6Q92537 303 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 NEK1Q96PY6 1258 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 ERVK-5Q9HDB9 667 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 RGS18Q9NS28 235 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 ST3GAL5Q9UNP4 418 aa14.64□□□□□ -0.07
TMEM54-206ENST00000482771 RBM8AQ9Y5S9 174 aaKnown RBP14.64□□□□□ -0.07
TMEM54-206ENST00000482771 SH2B2O14492 632 aaPredicted RBP14.63□□□□□ -0.07
TMEM54-206ENST00000482771 ST18O60284 1047 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 ATG7O95352 703 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 CALM1P0DP23 149 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 CALM2P0DP24 149 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 CALM3P0DP25 149 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 AVPR2P30518 371 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 VCPP55072 806 aaKnown RBP14.63□□□□□ -0.07
TMEM54-206ENST00000482771 ITGB3BPQ13352 177 aaPredicted RBP14.63□□□□□ -0.07
TMEM54-206ENST00000482771 DUSP6Q16828 381 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 FANCBQ8NB91 859 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 TMEM40Q8WWA1 233 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 TMEM87BQ96K49 555 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 CDCA3Q99618 268 aaPredicted RBP14.63□□□□□ -0.07
TMEM54-206ENST00000482771 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 APOL5Q9BWW9 433 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 S1PR5Q9H228 398 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 FAM86C1Q9NVL1 165 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
TMEM54-206ENST00000482771 HCSTQ9UBK5 93 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 SLC12A7Q9Y666 1083 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 NFASCO94856 1347 aa14.63□□□□□ -0.07
TMEM54-206ENST00000482771 C9IYK1 514 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 BACH1O14867 736 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 GPR182O15218 404 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 HBP1O60381 514 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 TECP42680 631 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 FAM189BP81408 668 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 APOBRQ0VD83 1088 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 CEP55Q53EZ4 464 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 PDE12Q6L8Q7 609 aaKnown RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 FAM43BQ6ZT52 329 aaPredicted RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 COLGALT1Q8NBJ5 622 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 ATOH1Q92858 354 aaPredicted RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 ASIC4Q96FT7 647 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 SNX27Q96L92 541 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 ATP6V0A4Q9HBG4 840 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 AGO4Q9HCK5 861 aaKnown RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 C1orf112Q9NSG2 853 aa14.62□□□□□ -0.07
TMEM54-206ENST00000482771 PUF60Q9UHX1 559 aaKnown RBP14.62□□□□□ -0.07
TMEM54-206ENST00000482771 IGKV6D-21A0A0A0MT36 114 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 DDX39AO00148 427 aaKnown RBP14.61□□□□□ -0.07
TMEM54-206ENST00000482771 MEIS1O00470 390 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 FSCN2O14926 492 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 CCNE2O96020 404 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 FGFR1P11362 822 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 LIFRP42702 1097 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 SLC26A2P50443 739 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 PTPN21Q16825 1174 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 ZNF484Q5JVG2 852 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 PLPP4Q5VZY2 271 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 ANKRD54Q6NXT1 300 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 SYCE2Q6PIF2 218 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 ABHD15Q6UXT9 468 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 TMEM184AQ6ZMB5 413 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 TMTC3Q6ZXV5 915 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 ZBTB33Q86T24 672 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 PPP1R16BQ96T49 567 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 CWH43Q9H720 699 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 RIC8AQ9NPQ8 531 aa14.61□□□□□ -0.07
TMEM54-206ENST00000482771 SPTBN4Q9H254 2564 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 FSD2A1L4K1 749 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 GFRA3O60609 400 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 FOSP01100 380 aaPredicted RBP14.6□□□□□ -0.07
TMEM54-206ENST00000482771 SRGAP2BP0DMP2 458 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 SP100P23497 879 aaPredicted RBP14.6□□□□□ -0.07
TMEM54-206ENST00000482771 ZNF76P36508 570 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 CRYBB1P53674 252 aaPredicted RBP14.6□□□□□ -0.07
TMEM54-206ENST00000482771 KCNC3Q14003 757 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 KIZQ2M2Z5 673 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 FAM160B1Q5W0V3 765 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 WWC2Q6AWC2 1192 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 SWSAP1Q6NVH7 229 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 PDXDC2PQ6P474 469 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 TRMT1LQ7Z2T5 733 aaKnown RBP14.6□□□□□ -0.07
TMEM54-206ENST00000482771 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
TMEM54-206ENST00000482771 RIPOR3Q96MK2 946 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 IRF2BPLQ9H1B7 796 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 ZNF302Q9NR11 478 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 TMEM161AQ9NX61 479 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 USP34Q70CQ2 3546 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 LOXHD1Q8IVV2 1947 aa14.6□□□□□ -0.07
TMEM54-206ENST00000482771 MYO10Q9HD67 2058 aa14.59□□□□□ -0.07
TMEM54-206ENST00000482771 HIDE1A8MVS5 230 aa14.59□□□□□ -0.07
TMEM54-206ENST00000482771 ZBTB42B2RXF5 422 aa14.59□□□□□ -0.07
TMEM54-206ENST00000482771 H0Y858 1186 aa14.59□□□□□ -0.07
TMEM54-206ENST00000482771 PDGFBP01127 241 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms