RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
EXOSC3-205ENST00000482614 NAP1L4Q99733 375 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-205ENST00000482614 FTHL17Q9BXU8 183 aa17.32■□□□□ 0.36
EXOSC3-205ENST00000482614 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-205ENST00000482614 MTCH2Q9Y6C9 303 aa17.32■□□□□ 0.36
EXOSC3-205ENST00000482614 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 MAGEB2O15479 319 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 DTNBO60941 627 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 GCFC2P16383 781 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 GRB10Q13322 594 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 PPP4R3AQ6IN85 833 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 GJA10Q969M2 543 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 PADI3Q9ULW8 664 aa17.31■□□□□ 0.36
EXOSC3-205ENST00000482614 ZNF862O60290 1169 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 C22orf31O95567 290 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 OATP04181 439 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 KRT2P35908 639 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 PAK2Q13177 524 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 ODR4Q5SWX8 454 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 B3GNT9Q6UX72 402 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 PIK3AP1Q6ZUJ8 805 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 METTL13Q8N6R0 699 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 OXER1Q8TDS5 423 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 MTUS1Q9ULD2 1270 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 CHD7Q9P2D1 2997 aa17.3■□□□□ 0.36
EXOSC3-205ENST00000482614 LPXNO60711 386 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 TMOD1P28289 359 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 PRKCEQ02156 737 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 FBXO22Q8NEZ5 403 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 KCNMB3Q9NPA1 279 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 TTC3P53804 2025 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
EXOSC3-205ENST00000482614 SLC37A4O43826 429 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 RPS6KA5O75582 802 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 CRYBB1P53674 252 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 TRIM29Q14134 588 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 UGCGQ16739 394 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 EFCAB12Q6NXP0 572 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 GDPD5Q8WTR4 605 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 C17orf80Q9BSJ5 609 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 CDHR5Q9HBB8 845 aa17.28■□□□□ 0.36
EXOSC3-205ENST00000482614 UNC80Q8N2C7 3258 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 TBX3O15119 743 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 MARCH6O60337 910 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 NFX1Q12986 1120 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 PPP2R5CQ13362 524 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 XKR3Q5GH77 459 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 KRT40Q6A162 431 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 FIBCD1Q8N539 461 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 LINC01599Q8WXQ3 324 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 ERVK-5Q9HDB9 667 aa17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 NOC2LQ9Y3T9 749 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-205ENST00000482614 GPR182O15218 404 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 JAK2O60674 1132 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 DKC1O60832 514 aaKnown RBP eCLIP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 GPR32O75388 356 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 MMP1P03956 469 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 VTNP04004 478 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 STAG3L1P0CL83 205 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 CLCN3P51790 818 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 MRPS5P82675 430 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TBC1D8BQ0IIM8 1120 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 NR5A1Q13285 461 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 SKIV2LQ15477 1246 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 KIZQ2M2Z5 673 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 EARS2Q5JPH6 523 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TJAP1Q5JTD0 557 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 NPAS4Q8IUM7 802 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 LINC01465Q8N7H1 131 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 TNFRSF25Q93038 417 aa17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 ZNF689Q96CS4 500 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-205ENST00000482614 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms