RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
HMGN1-213ENST00000482192 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
HMGN1-213ENST00000482192 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
HMGN1-213ENST00000482192 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
HMGN1-213ENST00000482192 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
HMGN1-213ENST00000482192 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-213ENST00000482192 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 BTBD18B2RXH4 712 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 MAGEB2O15479 319 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 ST18O60284 1047 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 ZNF862O60290 1169 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 MARCH6O60337 910 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 FOSBP53539 338 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 HMGN5P82970 282 aaKnown RBP13.38□□□□□ -0.27
HMGN1-213ENST00000482192 PAK2Q13177 524 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 PPP2R5CQ13362 524 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGN1-213ENST00000482192 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 KIAA0319LQ8IZA0 1049 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 TOP1MTQ969P6 601 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 AGO3Q9H9G7 860 aaKnown RBP13.38□□□□□ -0.27
HMGN1-213ENST00000482192 VAV3Q9UKW4 847 aa13.38□□□□□ -0.27
HMGN1-213ENST00000482192 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 SIP14410 1827 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 ARHGEF15O94989 841 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 IGFBP4P22692 258 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 CD52P31358 61 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-213ENST00000482192 ADGRE1Q14246 886 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 FAM43BQ6ZT52 329 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-213ENST00000482192 ARNTL2Q8WYA1 636 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 HAS1Q92839 578 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-213ENST00000482192 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
HMGN1-213ENST00000482192 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGN1-213ENST00000482192 UPP2O95045 317 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
HMGN1-213ENST00000482192 TMOD1P28289 359 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 PSMC5P62195 406 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-213ENST00000482192 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 YME1L1Q96TA2 773 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 NIFKQ9BYG3 293 aaKnown RBP13.36□□□□□ -0.27
HMGN1-213ENST00000482192 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
HMGN1-213ENST00000482192 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 LINC01553A4QN01 128 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 EML1O00423 815 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 ENPP3O14638 875 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 NEMFO60524 1076 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
HMGN1-213ENST00000482192 CLCN3P51790 818 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 CRYBB1P53674 252 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-213ENST00000482192 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
HMGN1-213ENST00000482192 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGN1-213ENST00000482192 LINC01465Q8N7H1 131 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 FBXO18Q8NFZ0 1043 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
HMGN1-213ENST00000482192 MICAL3Q7RTP6 2002 aa13.35□□□□□ -0.27
HMGN1-213ENST00000482192 EPOPA6NHQ4 379 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 GPR182O15218 404 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 GPR32O75388 356 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 STBD1O95210 358 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 VTNP04004 478 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 POU3F3P20264 500 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 ERVK-21P61565 698 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 SPIRE1Q08AE8 756 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 EPHA7Q15375 998 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 CALCRLQ16602 461 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 TMEM266Q2M3C6 531 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 MTERF2Q49AM1 385 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 SPRED2Q7Z698 418 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 LRRC71Q8N4P6 559 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 TMEM40Q8WWA1 233 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 OSMRQ99650 979 aa13.34□□□□□ -0.27
HMGN1-213ENST00000482192 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-213ENST00000482192 SUGCTQ9HAC7 445 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms