RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 CYTH3O43739 400 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 MGEA5O60502 916 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ANGPT1Q15389 498 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ODR4Q5SWX8 454 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 CWF19L1Q69YN2 538 aaKnown RBP17.17■□□□□ 0.34
HDAC6-224ENST00000481929 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 SLC24A5Q71RS6 500 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 CCDC105Q8IYK2 499 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ZDHHC14Q8IZN3 488 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 NME8Q8N427 588 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 KCNG4Q8TDN1 519 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ADAM2Q99965 735 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 CWH43Q9H720 699 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 HCFC2Q9Y5Z7 792 aa17.17■□□□□ 0.34
HDAC6-224ENST00000481929 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 AOC1P19801 751 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 SDSP20132 328 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 PDE4AP27815 886 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 PPM1AP35813 382 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 KRT17Q04695 432 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 LIMD1Q9UGP4 676 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 GINS2Q9Y248 185 aa17.16■□□□□ 0.34
HDAC6-224ENST00000481929 TPRP12270 2363 aaKnown RBP17.16■□□□□ 0.34
HDAC6-224ENST00000481929 C9IYK1 514 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 FGFR1P11362 822 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 MTMR1Q13613 665 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 PCYT2Q99447 389 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 RTP3Q9BQQ7 232 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 SEMA4AQ9H3S1 761 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
HDAC6-224ENST00000481929 NOC2LQ9Y3T9 749 aaKnown RBP17.15■□□□□ 0.34
HDAC6-224ENST00000481929 DMXL1Q9Y485 3027 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 CEP250Q9BV73 2442 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 LMNAP02545 664 aaKnown RBP17.14■□□□□ 0.33
HDAC6-224ENST00000481929 ITGB5P18084 799 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
HDAC6-224ENST00000481929 PLCB4Q15147 1175 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 RARS2Q5T160 578 aaKnown RBP17.14■□□□□ 0.33
HDAC6-224ENST00000481929 KIAA1841Q6NSI8 718 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 KCNT2Q6UVM3 1135 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 DTWD2Q8NBA8 298 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 TMEM117Q9H0C3 514 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 JPH1Q9HDC5 661 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-224ENST00000481929 DBR1Q9UK59 544 aaKnown RBP17.14■□□□□ 0.33
HDAC6-224ENST00000481929 USTQ9Y2C2 406 aa17.14■□□□□ 0.33
HDAC6-224ENST00000481929 MEIS2O14770 477 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 GPR182O15218 404 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 PI15O43692 258 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 WEE2P0C1S8 567 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 CA8P35219 290 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 PUM1Q14671 1186 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC6-224ENST00000481929 ATAT1Q5SQI0 421 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
HDAC6-224ENST00000481929 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 KIAA2013Q8IYS2 634 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 MRPL43Q8N983 215 aaKnown RBP17.13■□□□□ 0.33
HDAC6-224ENST00000481929 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
HDAC6-224ENST00000481929 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 DZANK1Q9NVP4 752 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 SPG21Q9NZD8 308 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
HDAC6-224ENST00000481929 C2orf71A6NGG8 1288 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 HOXA2O43364 376 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 CLASP2O75122 1294 aaKnown RBP17.12■□□□□ 0.33
HDAC6-224ENST00000481929 EOMESO95936 686 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 NPR3P17342 541 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 PBX3P40426 434 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 CDHR5Q9HBB8 845 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 SLC9A2Q9UBY0 812 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 FBXL21Q9UKT6 434 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 UBIAD1Q9Y5Z9 338 aa17.12■□□□□ 0.33
HDAC6-224ENST00000481929 ERICH2A1L162 156 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
HDAC6-224ENST00000481929 MAFGO15525 162 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 STAT5BP51692 787 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 BMS1Q14692 1282 aaKnown RBP17.11■□□□□ 0.33
HDAC6-224ENST00000481929 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 PLPPR4Q7Z2D5 763 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
HDAC6-224ENST00000481929 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
HDAC6-224ENST00000481929 KRT37O76014 449 aa17.1■□□□□ 0.33
HDAC6-224ENST00000481929 KLRC1P26715 233 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms