RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NAALADL2Q58DX5 795 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 C1orf53Q5VUE5 145 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 KCNK18Q7Z418 384 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 NECAB2Q7Z6G3 386 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 UBE2Q1Q7Z7E8 422 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 C7orf31Q8N865 590 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 CEP89Q96ST8 783 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 GOLPH3LQ9H4A5 285 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 CYP26B1Q9NR63 512 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 BLOC1S4Q9NUP1 217 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 HDAC6Q9UBN7 1215 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 GTF2IRD1Q9UHL9 959 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 TRIP12Q14669 1992 aaPredicted RBP23.12■■□□□ 1.29
VPS16-207ENST00000481812 ZBTB42B2RXF5 422 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 E9PMD0 336 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 ARVCFO00192 962 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 ZBTB39O15060 712 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 EN2P19622 333 aaPredicted RBP23.11■■□□□ 1.29
VPS16-207ENST00000481812 MCM4P33991 863 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 STAT6P42226 847 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 CDK7P50613 346 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 XKR9Q5GH70 373 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 PDILTQ8N807 584 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 SYT2Q8N9I0 419 aaPredicted RBP23.11■■□□□ 1.29
VPS16-207ENST00000481812 ENGASEQ8NFI3 743 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 LARP4BQ92615 738 aaKnown RBP23.11■■□□□ 1.29
VPS16-207ENST00000481812 RAD54LQ92698 747 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 CEP170P1Q96L14 293 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 PLIN2Q99541 437 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 SENP6Q9GZR1 1112 aaPredicted RBP23.11■■□□□ 1.29
VPS16-207ENST00000481812 C11orf49Q9H6J7 331 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 MAGEF1Q9HAY2 307 aa23.11■■□□□ 1.29
VPS16-207ENST00000481812 FAM160A1Q05DH4 1040 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 SNX17Q15036 470 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 GRIK4Q16099 956 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 SLC39A5Q6ZMH5 540 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 LRRC15Q8TF66 581 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 PAWRQ96IZ0 340 aaKnown RBP23.1■■□□□ 1.29
VPS16-207ENST00000481812 JPH2Q9BR39 696 aaPredicted RBP23.1■■□□□ 1.29
VPS16-207ENST00000481812 PANK2Q9BZ23 570 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 BHMT2Q9H2M3 363 aa23.1■■□□□ 1.29
VPS16-207ENST00000481812 EVPLQ92817 2033 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 C17orf102A2RUQ5 167 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 MBLAC1A4D2B0 266 aaPredicted RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 MAGEB2O15479 319 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 PLA2G4BP0C869 781 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 RFC5P40937 340 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 SLC12A3P55017 1021 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 NPEPPSP55786 919 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 TRMT1LQ7Z2T5 733 aaKnown RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 FMR1NBQ8N0W7 255 aaPredicted RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 DIS3LQ8TF46 1054 aaKnown RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 CCDC43Q96MW1 224 aaKnown RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 DHX33Q9H6R0 707 aaKnown RBP23.09■■□□□ 1.29
VPS16-207ENST00000481812 KCND2Q9NZV8 630 aa23.09■■□□□ 1.29
VPS16-207ENST00000481812 MROH7Q68CQ1 1323 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 ARHGEF35A5YM69 484 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 TMEM150BA6NC51 233 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 GAS2O43903 313 aaKnown RBP23.08■■□□□ 1.29
VPS16-207ENST00000481812 MAFO75444 373 aaPredicted RBP23.08■■□□□ 1.29
VPS16-207ENST00000481812 DGAT1O75907 488 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 ZNF202O95125 648 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 SLFN14P0C7P3 912 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 PTMSP20962 102 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 CHMP4BP1P59074 171 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 SNW1Q13573 536 aaKnown RBP23.08■■□□□ 1.29
VPS16-207ENST00000481812 MTERF2Q49AM1 385 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 MARCH8Q5T0T0 291 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 PLA2G4FQ68DD2 849 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 SV2BQ7L1I2 683 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 DHX58Q96C10 678 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 TIGD1Q96MW7 591 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 PDLIM7Q9NR12 457 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 SETD4Q9NVD3 440 aa23.08■■□□□ 1.29
VPS16-207ENST00000481812 A0A087WWV3 80 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 IGKV6-21A0A0C4DH24 114 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 TBC1D8BQ0IIM8 1120 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 LRRC27Q9C0I9 530 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 TNMDQ9H2S6 317 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 KBTBD4Q9NVX7 518 aa23.07■■□□□ 1.28
VPS16-207ENST00000481812 ACTN4O43707 911 aaKnown RBP23.06■■□□□ 1.28
VPS16-207ENST00000481812 C22orf31O95567 290 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 LIG1P18858 919 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 KLRC1P26715 233 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 AMPD3Q01432 767 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 MCM6Q14566 821 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 FAM47CQ5HY64 1035 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 GDF6Q6KF10 455 aaPredicted RBP23.06■■□□□ 1.28
VPS16-207ENST00000481812 RINT1Q6NUQ1 792 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 KANK3Q6NY19 840 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 PADI6Q6TGC4 694 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 MTHFD1LQ6UB35 978 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 ANKRD33Q7Z3H0 272 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 ELOA2Q8IYF1 753 aaPredicted RBP23.06■■□□□ 1.28
VPS16-207ENST00000481812 CEP57L1Q8IYX8 460 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 SLC7A3Q8WY07 619 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 CCDC34Q96HJ3 373 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 TOX2Q96NM4 488 aa23.06■■□□□ 1.28
VPS16-207ENST00000481812 TIPINQ9BVW5 301 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms