RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 TAAR1Q96RJ0 339 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 USP26Q9BXU7 913 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 FTOQ9C0B1 505 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13D-208ENST00000481484 NKX2-4Q9H2Z4 354 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 PRDM12Q9H4Q4 367 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 LY9Q9HBG7 655 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 TMPRSS4Q9NRS4 437 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 RBM28Q9NW13 759 aaKnown RBP4.76□□□□□ -1.65
VPS13D-208ENST00000481484 COL20A1Q9P218 1284 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 YBX2Q9Y2T7 364 aaKnown RBP4.76□□□□□ -1.65
VPS13D-208ENST00000481484 RWDD3Q9Y3V2 267 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 RBM8AQ9Y5S9 174 aaKnown RBP4.76□□□□□ -1.65
VPS13D-208ENST00000481484 ZNF318Q5VUA4 2279 aa4.76□□□□□ -1.65
VPS13D-208ENST00000481484 TCF20Q9UGU0 1960 aaKnown RBP4.76□□□□□ -1.65
VPS13D-208ENST00000481484 NRCAMQ92823 1304 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 FSD2A1L4K1 749 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 C17orf102A2RUQ5 167 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SPDYE3A6NKU9 549 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 H3BRB1 525 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SH2B2O14492 632 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 MAFGO15525 162 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 PRC1O43663 620 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 MAN1A2O60476 641 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 PPP1R11O60927 126 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 LGR5O75473 907 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 GJB5O95377 273 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 FOSP01100 380 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 AMHP03971 560 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 LGALS2P05162 132 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CA3P07451 260 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CKBP12277 381 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 MYCLP12524 364 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 ADD1P35611 737 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SLC26A2P50443 739 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SETQ01105 290 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 NR1H3Q13133 447 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 AP3B2Q13367 1082 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 IKBKEQ14164 716 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 TRIM71Q2Q1W2 868 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 GDF6Q6KF10 455 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SYNE3Q6ZMZ3 975 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 NFXL1Q6ZNB6 911 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 TMTC3Q6ZXV5 915 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CHST3Q7LGC8 479 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 DEFB128Q7Z7B8 93 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 RPAINQ86UA6 219 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 FAM177A1Q8N128 213 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CCDC12Q8WUD4 166 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SEPT8Q92599 483 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 IRF7Q92985 503 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 TGS1Q96RS0 853 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CTAGE1Q96RT6 745 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 PIGSQ96S52 555 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 RAD9AQ99638 391 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 ESYT1Q9BSJ8 1104 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 IL25Q9H293 177 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 CPVLQ9H3G5 476 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 TUT1Q9H6E5 874 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 MLXIPQ9HAP2 919 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 HDAC6Q9UBN7 1215 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 TCEAL9Q9UHQ7 104 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 DNMT3LQ9UJW3 386 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 INSL6Q9Y581 213 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 SLC12A7Q9Y666 1083 aa4.75□□□□□ -1.65
VPS13D-208ENST00000481484 DDX49Q9Y6V7 483 aaKnown RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 FNDC1Q4ZHG4 1894 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-208ENST00000481484 NFASCO94856 1347 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 CNTNAP5Q8WYK1 1306 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ARID2Q68CP9 1835 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 CCDC196A0A1B0GTZ2 297 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ESYT2A0FGR8 921 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 TTLL8A6PVC2 850 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 GRXCR1A8MXD5 290 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 RSPH10B2B2RC85 870 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 SPATA31C2B4DYI2 1134 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 M0QZ92 97 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 EPB41L2O43491 1005 aaKnown RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 CYTH3O43739 400 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 CDC45O75419 566 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 RSPH10BP0C881 870 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 SMIM10L2AP0DMW4 78 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 SMIM10L2BP0DMW5 78 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 VSIG8P0DPA2 414 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 IGFBP4P22692 258 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PTGS1P23219 599 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 HOXA13P31271 388 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ADCY7P51828 1080 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ANTXR2P58335 489 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 ERVK-21P61565 698 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PTH1RQ03431 593 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 MTMR1Q13613 665 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 PTPROQ16827 1216 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 HSDL1Q3SXM5 330 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 NIPA1Q7RTP0 329 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 FCHSD1Q86WN1 690 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 MICU3Q86XE3 530 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 KDF1Q8NAX2 398 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-208ENST00000481484 USP38Q8NB14 1042 aa4.74□□□□□ -1.65
VPS13D-208ENST00000481484 CCDC148Q8NFR7 591 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms