RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 FIGNQ5HY92 759 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 FKBP15Q5T1M5 1219 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 KIAA1328Q86T90 577 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 ATP2A1O14983 1001 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 TBCAO75347 108 aaKnown RBP20.26■□□□□ 0.83
MRPL28-209ENST00000481453 ERCC3P19447 782 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 CYLC1P35663 651 aaPredicted RBP20.26■□□□□ 0.83
MRPL28-209ENST00000481453 MARSP56192 900 aaKnown RBP20.26■□□□□ 0.83
MRPL28-209ENST00000481453 NEK9Q8TD19 979 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 ABCB6Q9NP58 842 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 OLFML3Q9NRN5 406 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
MRPL28-209ENST00000481453 LOXHD1Q8IVV2 1947 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 ENC1O14682 589 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 ZBED6P86452 979 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 KNOP1Q1ED39 458 aaKnown RBP20.25■□□□□ 0.83
MRPL28-209ENST00000481453 PPP4R3CPQ6ZMV5 832 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 MIER3Q7Z3K6 550 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 NOA1Q8NC60 698 aaKnown RBP20.25■□□□□ 0.83
MRPL28-209ENST00000481453 TFR2Q9UP52 801 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 TRAF3IP3Q9Y228 551 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 A0A1W2PQJ5 194 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-209ENST00000481453 PRPF6O94906 941 aaKnown RBP20.25■□□□□ 0.83
MRPL28-209ENST00000481453 MYCLP12524 364 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-209ENST00000481453 GAP43P17677 238 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 VSNL1P62760 191 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 GPS2Q13227 327 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 SYT17Q9BSW7 474 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
MRPL28-209ENST00000481453 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 EPHB6O15197 1021 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 KRT86O43790 486 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
MRPL28-209ENST00000481453 TUBBP07437 444 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 ZNF131P52739 623 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 ARHGEF16Q5VV41 709 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 TRIM59Q8IWR1 403 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 FIZ1Q96SL8 496 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
MRPL28-209ENST00000481453 HDAC6Q9UBN7 1215 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
MRPL28-209ENST00000481453 H3BQF6 201 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 ATP9AO75110 1047 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 CCDC170Q8IYT3 715 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 EHBP1Q8NDI1 1231 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 LCTP09848 1927 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 ASTN1O14525 1302 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 MYPNQ86TC9 1320 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 GNA14O95837 355 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 P4HBP07237 508 aaKnown RBP20.23■□□□□ 0.83
MRPL28-209ENST00000481453 KCNA1Q09470 495 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 CCDC40Q4G0X9 1142 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 CCDC155Q8N6L0 562 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 SAR1BQ9Y6B6 198 aa20.23■□□□□ 0.83
MRPL28-209ENST00000481453 ZMYM2Q9UBW7 1377 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 FAM13AO94988 1023 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 ATP1A1P05023 1023 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 ADAM9Q13443 819 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 VSIG10LQ86VR7 867 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 DCPSQ96C86 337 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 TEX13BQ9BXU2 312 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 SUGCTQ9HAC7 445 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 EIF3CLB5ME19 914 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 PDXKO00764 312 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 EIF3JO75822 258 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 GCNT3O95395 438 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 NR2F2P24468 414 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 NMT1P30419 496 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 KCNMA1Q12791 1236 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 MAPK7Q13164 816 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 EIF3CQ99613 913 aaKnown RBP20.22■□□□□ 0.83
MRPL28-209ENST00000481453 PARVGQ9HBI0 331 aa20.22■□□□□ 0.83
MRPL28-209ENST00000481453 CCNE2O96020 404 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 TREML2Q5T2D2 321 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 XRRA1Q6P2D8 792 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 DAW1Q8N136 415 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 MYCT1Q8N699 235 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 IQCDQ96DY2 449 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 TYW1Q9NV66 732 aaKnown RBP20.21■□□□□ 0.83
MRPL28-209ENST00000481453 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 CALCOCO1Q9P1Z2 691 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 ODF2LQ9ULJ1 636 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 EIF3DO15371 548 aaKnown RBP eCLIP20.21■□□□□ 0.83
MRPL28-209ENST00000481453 NR3C2P08235 984 aa20.21■□□□□ 0.83
MRPL28-209ENST00000481453 CCND2P30279 289 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms