RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 YWHABP31946 246 aaKnown RBP22.79■■□□□ 1.24
CTSA-206ENST00000480961 PRPHP41219 470 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 RBL2Q08999 1139 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 PPIGQ13427 754 aaKnown RBP eCLIP22.79■■□□□ 1.241e-7■■□□□ 12.9
CTSA-206ENST00000480961 MBTPS1Q14703 1052 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 TARBP2Q15633 366 aaKnown RBP22.79■■□□□ 1.24
CTSA-206ENST00000480961 C9orf50Q5SZB4 431 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 TAF2Q6P1X5 1199 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 C4orf19Q8IY42 314 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 LRRC71Q8N4P6 559 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 USP28Q96RU2 1077 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 SUGCTQ9HAC7 445 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 TFIP11Q9UBB9 837 aaKnown RBP22.79■■□□□ 1.24
CTSA-206ENST00000480961 CEP131Q9UPN4 1083 aa22.79■■□□□ 1.24
CTSA-206ENST00000480961 DKC1O60832 514 aaKnown RBP eCLIP22.78■■□□□ 1.24
CTSA-206ENST00000480961 F13A1P00488 732 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 CLCN3P51790 818 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 PDIA5Q14554 519 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 SHHQ15465 462 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 KIAA0319LQ8IZA0 1049 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 IGSF22Q8N9C0 903 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 ERMNQ8TAM6 284 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 PIGOQ8TEQ8 1089 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 CEP170P1Q96L14 293 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 PPP1R16BQ96T49 567 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 IL23AQ9NPF7 189 aa22.78■■□□□ 1.24
CTSA-206ENST00000480961 SMIM35A0A1B0GVV1 85 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 NBNO60934 754 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 CHRNA1P02708 482 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 MARCKSP29966 332 aaPredicted RBP22.77■■□□□ 1.24
CTSA-206ENST00000480961 BMP8BP34820 402 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 CCT6AP40227 531 aaKnown RBP22.77■■□□□ 1.24
CTSA-206ENST00000480961 GRIN1Q05586 938 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 TBC1D8BQ0IIM8 1120 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 PTPAQ15257 358 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 ECM1Q16610 540 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 EFCAB12Q6NXP0 572 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 POTEGQ6S5H5 508 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 ZNF365Q70YC5 407 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 RSPH3Q86UC2 560 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 NEK9Q8TD19 979 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 CEP89Q96ST8 783 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.77■■□□□ 1.243e-6■■■■□ 22
CTSA-206ENST00000480961 POLR3CQ9BUI4 534 aaPredicted RBP22.77■■□□□ 1.24
CTSA-206ENST00000480961 CYP26B1Q9NR63 512 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 BMP2KQ9NSY1 1161 aaPredicted RBP22.77■■□□□ 1.24
CTSA-206ENST00000480961 ZDHHC9Q9Y397 364 aa22.77■■□□□ 1.24
CTSA-206ENST00000480961 ZRSR1Q15695 479 aaKnown RBP22.76■■□□□ 1.23
CTSA-206ENST00000480961 XKR9Q5GH70 373 aa22.76■■□□□ 1.23
CTSA-206ENST00000480961 TMEM240Q5SV17 173 aa22.76■■□□□ 1.23
CTSA-206ENST00000480961 SNX29Q8TEQ0 813 aa22.76■■□□□ 1.23
CTSA-206ENST00000480961 RAB34Q9BZG1 259 aa22.76■■□□□ 1.23
CTSA-206ENST00000480961 TUFT1Q9NNX1 390 aa22.76■■□□□ 1.23
CTSA-206ENST00000480961 MAGEB2O15479 319 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 LYPLA2O95372 231 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 BMP15O95972 392 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 VTNP04004 478 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 PDIA4P13667 645 aaKnown RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 RPA1P27694 616 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 MRPS6P82932 125 aaKnown RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 DRP2Q13474 957 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 TCTN1Q2MV58 587 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 ARL6IP4Q66PJ3 421 aaKnown RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 OTUD6AQ7L8S5 288 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 RPAINQ86UA6 219 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 RPUSD2Q8IZ73 545 aaKnown RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 ZNF668Q96K58 619 aaPredicted RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 MMTAG2Q9BU76 263 aaKnown RBP22.75■■□□□ 1.23
CTSA-206ENST00000480961 GINS2Q9Y248 185 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 CDY2AQ9Y6F7 541 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 LTBP2Q14767 1821 aa22.75■■□□□ 1.23
CTSA-206ENST00000480961 TRIP12Q14669 1992 aaPredicted RBP22.74■■□□□ 1.23
CTSA-206ENST00000480961 LAMA2P24043 3122 aaKnown RBP22.74■■□□□ 1.23
CTSA-206ENST00000480961 CAND2O75155 1236 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 BRD1O95696 1058 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 FGBP02675 491 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 RFC2P35250 354 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 MGAT3Q09327 533 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 MKRN4PQ13434 485 aaPredicted RBP22.74■■□□□ 1.23
CTSA-206ENST00000480961 FAM26DQ5JW98 314 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 KRT79Q5XKE5 535 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 OTOP2Q7RTS6 562 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 CHAMP1Q96JM3 812 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 PLIN2Q99541 437 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 CDHR5Q9HBB8 845 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 KIAA1024Q9UPX6 916 aa22.74■■□□□ 1.23
CTSA-206ENST00000480961 MAFO75444 373 aaPredicted RBP22.73■■□□□ 1.23
CTSA-206ENST00000480961 IER5Q5VY09 327 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 HAUS3Q68CZ6 603 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 TDHQ8IZJ6 230 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 LINC01465Q8N7H1 131 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 ZNF396Q96N95 335 aaPredicted RBP22.73■■□□□ 1.23
CTSA-206ENST00000480961 CLIC6Q96NY7 704 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 AKT3Q9Y243 479 aa22.73■■□□□ 1.23
CTSA-206ENST00000480961 GHRP10912 638 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 POLGP54098 1239 aaPredicted RBP22.72■■□□□ 1.23
CTSA-206ENST00000480961 KIZQ2M2Z5 673 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 SPECC1Q5M775 1068 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 NME8Q8N427 588 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 TMEM143Q96AN5 459 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms