RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PPP1R16BQ96T49 567 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 LRFN3Q9BTN0 628 aa21.38■■□□□ 1.01
ABCF3-214ENST00000480562 NOC2LQ9Y3T9 749 aaKnown RBP21.38■■□□□ 1.01
ABCF3-214ENST00000480562 COL1A2P08123 1366 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 ATG2AQ2TAZ0 1938 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 GNA11P29992 359 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 SSTR3P32745 418 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-214ENST00000480562 SETQ01105 290 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-214ENST00000480562 NTRK3Q16288 839 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 MCTP2Q6DN12 878 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 CMTR2Q8IYT2 770 aaKnown RBP21.37■■□□□ 1.01
ABCF3-214ENST00000480562 TMEM40Q8WWA1 233 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 PLVAPQ9BX97 442 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 SLC26A6Q9BXS9 759 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 AGXT2Q9BYV1 514 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 ERVK-5Q9HDB9 667 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 TBC1D22BQ9NU19 505 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 PLAGL2Q9UPG8 496 aa21.37■■□□□ 1.01
ABCF3-214ENST00000480562 FAM86C2PA6NEL3 165 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 MGEA5O60502 916 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 RPS6KA5O75582 802 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 STAG3L1P0CL83 205 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 LTBRP36941 435 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
ABCF3-214ENST00000480562 HYAL1Q12794 435 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 PUS10Q3MIT2 529 aaKnown RBP21.36■■□□□ 1.01
ABCF3-214ENST00000480562 ZNF746Q6NUN9 644 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-214ENST00000480562 FBXL16Q8N461 479 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 NCOA5Q9HCD5 579 aaKnown RBP21.36■■□□□ 1.01
ABCF3-214ENST00000480562 VPS54Q9P1Q0 977 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 LRFN2Q9ULH4 789 aa21.36■■□□□ 1.01
ABCF3-214ENST00000480562 MAFBQ9Y5Q3 323 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-214ENST00000480562 EVPLQ92817 2033 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 C22orf31O95567 290 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 MMP1P03956 469 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 PDIA3P30101 505 aaKnown RBP21.35■■□□□ 1.01
ABCF3-214ENST00000480562 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.01
ABCF3-214ENST00000480562 CAMK1Q14012 370 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 TMEM31Q5JXX7 168 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 BBXQ8WY36 941 aaPredicted RBP21.35■■□□□ 1.01
ABCF3-214ENST00000480562 IGFLR1Q9H665 355 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 C11orf16Q9NQ32 467 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 GABBR1Q9UBS5 961 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 TCEAL9Q9UHQ7 104 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 ST3GAL5Q9UNP4 418 aa21.35■■□□□ 1.01
ABCF3-214ENST00000480562 PI4K2BG5E9Z4 385 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 VTNP04004 478 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 ITGB1P05556 798 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 PSAPP07602 524 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 DNAJB1P25685 340 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 PSMA5P28066 241 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 CIITAP33076 1130 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 SARSP49591 514 aaKnown RBP21.34■■□□□ 1.01
ABCF3-214ENST00000480562 DLX2Q07687 328 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-214ENST00000480562 CLUL1Q15846 466 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 KIZQ2M2Z5 673 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 CTC1Q2NKJ3 1217 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 SMAP1Q8IYB5 467 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-214ENST00000480562 METTL13Q8N6R0 699 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 KLHL23Q8NBE8 558 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 BICD2Q8TD16 824 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 LENG9Q96B70 501 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 ADAM2Q99965 735 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 RNF26Q9BY78 433 aaPredicted RBP21.34■■□□□ 1.01
ABCF3-214ENST00000480562 PCDHB7Q9Y5E2 793 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 PCDHA10Q9Y5I2 948 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 KIAA1671Q9BY89 1806 aa21.34■■□□□ 1.01
ABCF3-214ENST00000480562 NCK2O43639 380 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 EDIL3O43854 480 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 REC8O95072 547 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 IFNAR1P17181 557 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 CCDC148Q8NFR7 591 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 SPPL3Q8TCT6 385 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 P2RX5Q93086 422 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 OSMRQ99650 979 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 SAMM50Q9Y512 469 aa21.33■■□□□ 1.01
ABCF3-214ENST00000480562 DENND3A2RUS2 1198 aa21.32■■□□□ 1
ABCF3-214ENST00000480562 LINC01565O15544 149 aa21.32■■□□□ 1
ABCF3-214ENST00000480562 FAM228AQ86W67 206 aa21.32■■□□□ 1
ABCF3-214ENST00000480562 RGS18Q9NS28 235 aa21.32■■□□□ 1
ABCF3-214ENST00000480562 MYH9P35579 1960 aaKnown RBP21.32■■□□□ 1
ABCF3-214ENST00000480562 GPR182O15218 404 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 MSH4O15457 936 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 GPR32O75388 356 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 IRS1P35568 1242 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 CLCN3P51790 818 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 CRYBB1P53674 252 aaPredicted RBP21.31■■□□□ 1
ABCF3-214ENST00000480562 EVCP57679 992 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 NAALADL2Q58DX5 795 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 FAM102BQ5T8I3 360 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 GJA10Q969M2 543 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 LARP6Q9BRS8 491 aaKnown RBP21.31■■□□□ 1
ABCF3-214ENST00000480562 FAM50BQ9Y247 325 aa21.31■■□□□ 1
ABCF3-214ENST00000480562 TBKBP1A7MCY6 615 aa21.3■■□□□ 1
ABCF3-214ENST00000480562 WDR64B1ANS9 1081 aa21.3■■□□□ 1
ABCF3-214ENST00000480562 C9IYK1 514 aa21.3■■□□□ 1
ABCF3-214ENST00000480562 CHMP2AO43633 222 aa21.3■■□□□ 1
ABCF3-214ENST00000480562 GPR37L1O60883 481 aa21.3■■□□□ 1
ABCF3-214ENST00000480562 TBX10O75333 385 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms