RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 GDF15Q99988 308 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 HSD17B14Q9BPX1 270 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 ZBTB39O15060 712 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 SELPP16109 830 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 CDC25AP30304 524 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 EPHB4P54760 987 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 NPEPPSP55786 919 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 GRIN1Q05586 938 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 TBC1D8BQ0IIM8 1120 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 TRAF7Q6Q0C0 670 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 TUFT1Q9NNX1 390 aa16.94■□□□□ 0.3
ABCF3-213ENST00000480539 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-213ENST00000480539 SIP14410 1827 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 SCN5AQ14524 2016 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 A0A087WWV3 80 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 ACRP10323 421 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 TMEM62Q0P6H9 643 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.33e-6■□□□□ 9.8
ABCF3-213ENST00000480539 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
ABCF3-213ENST00000480539 DEFB128Q7Z7B8 93 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 LRRC71Q8N4P6 559 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 METTL13Q8N6R0 699 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 PIGOQ8TEQ8 1089 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 CEP170P1Q96L14 293 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 CCDC43Q96MW1 224 aaKnown RBP16.93■□□□□ 0.3
ABCF3-213ENST00000480539 PPP1R16BQ96T49 567 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 NIFKQ9BYG3 293 aaKnown RBP16.93■□□□□ 0.3
ABCF3-213ENST00000480539 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
ABCF3-213ENST00000480539 CYP26B1Q9NR63 512 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 TFIP11Q9UBB9 837 aaKnown RBP16.93■□□□□ 0.3
ABCF3-213ENST00000480539 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
ABCF3-213ENST00000480539 KAT6AQ92794 2004 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 CAND2O75155 1236 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 LYPLA2O95372 231 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 RPA1P27694 616 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 NASPP49321 788 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-213ENST00000480539 PDIA5Q14554 519 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 STK38Q15208 465 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
ABCF3-213ENST00000480539 ECM1Q16610 540 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 XKR9Q5GH70 373 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 CEP89Q96ST8 783 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
ABCF3-213ENST00000480539 FBXO2Q9UK22 296 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-213ENST00000480539 CEP290O15078 2479 aa16.92■□□□□ 0.3
ABCF3-213ENST00000480539 RSPH10B2B2RC85 870 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 VTNP04004 478 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 RSPH10BP0C881 870 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 DDIT3P35638 169 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 POLGP54098 1239 aaPredicted RBP16.91■□□□□ 0.3
ABCF3-213ENST00000480539 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
ABCF3-213ENST00000480539 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
ABCF3-213ENST00000480539 MBTPS1Q14703 1052 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 EFCAB12Q6NXP0 572 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 OTUD6AQ7L8S5 288 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 LINC01465Q8N7H1 131 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 SUGCTQ9HAC7 445 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 IL23AQ9NPF7 189 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 DDX19AQ9NUU7 478 aaKnown RBP16.91■□□□□ 0.3
ABCF3-213ENST00000480539 AKT3Q9Y243 479 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 CDY2AQ9Y6F7 541 aa16.91■□□□□ 0.3
ABCF3-213ENST00000480539 MAGEB2O15479 319 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 NBNO60934 754 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 MGAT3Q09327 533 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 DRP2Q13474 957 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 EMC2Q15006 297 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 SLC39A14Q15043 492 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 SPECC1Q5M775 1068 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 KIAA0319LQ8IZA0 1049 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 VWCEQ96DN2 955 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 CLIC6Q96NY7 704 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 OSBPL7Q9BZF2 842 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 CSRNP2Q9H175 543 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 ANKEF1Q9NU02 776 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 KIAA1024Q9UPX6 916 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 COLQQ9Y215 455 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-213ENST00000480539 STK24Q9Y6E0 443 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 KDM3AQ9Y4C1 1321 aa16.9■□□□□ 0.3
ABCF3-213ENST00000480539 M0QZ92 97 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 MAFO75444 373 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 CHRNA1P02708 482 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms