RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 INSRRP14616 1297 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 PBX2P40425 430 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 GDF6Q6KF10 455 aaPredicted RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 ANO5Q75V66 913 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 TPH2Q8IWU9 490 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.212e-11■□□□□ 8.7
TRA2B-212ENST00000480461 SH2D3AQ9BRG2 576 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 POLR3CQ9BUI4 534 aaPredicted RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 PRDM12Q9H4Q4 367 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 TRMT13Q9NUP7 481 aaKnown RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 PPP6R2O75170 966 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 CD4P01730 458 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 RPA1P27694 616 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 PSMC5P62195 406 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 FAAP100Q0VG06 881 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 ADGRE1Q14246 886 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 STK38Q15208 465 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 ANKRD33Q7Z3H0 272 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 ATP8B4Q8TF62 1192 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
TRA2B-212ENST00000480461 PNMA5Q96PV4 448 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 LXNQ9BS40 222 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 GTF2IRD1Q9UHL9 959 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 CFAP45Q9UL16 551 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 PCDHA7Q9UN72 937 aa13.71□□□□□ -0.21
TRA2B-212ENST00000480461 SCN10AQ9Y5Y9 1956 aa13.71□□□□□ -0.22
TRA2B-212ENST00000480461 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 TREHO43280 583 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 B4GALT4O60513 344 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 LYPLA2O95372 231 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 SLC26A2P50443 739 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 NPEPPSP55786 919 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 PRKCEQ02156 737 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 GRB10Q13322 594 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
TRA2B-212ENST00000480461 TMEM266Q2M3C6 531 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 SHC4Q6S5L8 630 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 KCNK18Q7Z418 384 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 C4orf19Q8IY42 314 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 C7orf31Q8N865 590 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
TRA2B-212ENST00000480461 PIGOQ8TEQ8 1089 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 LMBR1Q8WVP7 490 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 WNT8BQ93098 351 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
TRA2B-212ENST00000480461 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 REV3LO60673 3130 aa13.7□□□□□ -0.22
TRA2B-212ENST00000480461 A0A087X0B3 334 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 HBP1O60381 514 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 OATP04181 439 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 CCT6AP40227 531 aaKnown RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 KRT85P78386 507 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 GRIK4Q16099 956 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 XKR3Q5GH77 459 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 ATP6V0A1Q93050 837 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 PLIN2Q99541 437 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 TUFT1Q9NNX1 390 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
TRA2B-212ENST00000480461 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
TRA2B-212ENST00000480461 NRCAMQ92823 1304 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
TRA2B-212ENST00000480461 TIMP1P01033 207 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 CYP2C9P11712 490 aa13.68□□□□□ -0.22
TRA2B-212ENST00000480461 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms