RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 RAB23Q9ULC3 237 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 TENM4Q6N022 2769 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 MGEA5O60502 916 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 APPP05067 770 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
USP11-208ENST00000480104 CT47B1P0C2W7 299 aaPredicted RBP13.88□□□□□ -0.19
USP11-208ENST00000480104 FGFR1P11362 822 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 NOVP48745 357 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 PTPN14Q15678 1187 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 UTP14CQ5TAP6 766 aaKnown RBP13.88□□□□□ -0.19
USP11-208ENST00000480104 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 SLC22A17Q8WUG5 538 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
USP11-208ENST00000480104 SFXN1Q9H9B4 322 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 TELO2Q9Y4R8 837 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 MYH7P12883 1935 aa13.88□□□□□ -0.19
USP11-208ENST00000480104 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 MYO18BQ8IUG5 2567 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 KALRNO60229 2985 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 RETP07949 1114 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 GBP2P32456 591 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 STARD6P59095 220 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 CSRP2Q16527 193 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 SOWAHCQ53LP3 525 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 GLG1Q92896 1179 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 MAP4K1Q92918 833 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 ZBTB10Q96DT7 871 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 MAF1Q9H063 256 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 FAM49AQ9H0Q0 323 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 SPG21Q9NZD8 308 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP11-208ENST00000480104 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
USP11-208ENST00000480104 SQORQ9Y6N5 450 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 COL4A3Q01955 1670 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 ABCB11O95342 1321 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 IGSF9BQ9UPX0 1349 aa13.87□□□□□ -0.19
USP11-208ENST00000480104 HECTD1Q9ULT8 2610 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 MBLAC1A4D2B0 266 aaPredicted RBP13.86□□□□□ -0.19
USP11-208ENST00000480104 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 GPAA1O43292 621 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
USP11-208ENST00000480104 TGFB3P10600 412 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
USP11-208ENST00000480104 PDHBP11177 359 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 PPARAQ07869 468 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 GRIK4Q16099 956 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 MCF2L2Q86YR7 1114 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 IFNL3Q8IZI9 196 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 TMEM57Q8N5G2 664 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 ZCCHC14Q8WYQ9 949 aaKnown RBP13.86□□□□□ -0.19
USP11-208ENST00000480104 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 SLC2A4RGQ9NR83 387 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
USP11-208ENST00000480104 KANSL1LA0AUZ9 987 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 TM4SF5O14894 197 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 CXCL14O95715 111 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 ATP5JP18859 108 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 UBXN2BQ14CS0 331 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 MARCH8Q5T0T0 291 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 IER5Q5VY09 327 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 METTL7BQ6UX53 244 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 SHDQ96IW2 340 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 MYADMQ96S97 322 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 PRMT8Q9NR22 394 aaPredicted RBP13.85□□□□□ -0.19
USP11-208ENST00000480104 MIA3Q5JRA6 1907 aa13.85□□□□□ -0.19
USP11-208ENST00000480104 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
USP11-208ENST00000480104 GNAT2P19087 354 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 SPINK2P20155 84 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
USP11-208ENST00000480104 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
USP11-208ENST00000480104 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 SLC39A11Q8N1S5 342 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 NXPE3Q969Y0 559 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 ADAM2Q99965 735 aa13.84□□□□□ -0.19
USP11-208ENST00000480104 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 C9IYK1 514 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms