RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 RMND1Q9NWS8 449 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 MAPK8IP1Q9UQF2 711 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 GJA3Q9Y6H8 435 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 AKAP11Q9UKA4 1901 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 CHD4Q14839 1912 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 SBF1O95248 1867 aa11.83□□□□□ -0.52
CHD6-208ENST00000480022 MAP3K13O43283 966 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
CHD6-208ENST00000480022 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
CHD6-208ENST00000480022 KRT16P08779 473 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MYBP10242 640 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 PCK1P35558 622 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 PRCPP42785 496 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MSH2P43246 934 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 TUBP50607 506 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 SF3A3Q12874 501 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD6-208ENST00000480022 RRP12Q5JTH9 1297 aaKnown RBP11.82□□□□□ -0.52
CHD6-208ENST00000480022 CYB5R4Q7L1T6 521 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 GMLQ99445 158 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 STK38LQ9Y2H1 464 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 TRIM75PA6NK02 468 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 HIP1RO75146 1068 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MMEP08473 750 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 ECHS1P30084 290 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 KLK7P49862 253 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 ERVK-9P63128 1117 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MAEAQ7L5Y9 396 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 RAB17Q9H0T7 212 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 CABP5Q9NP86 173 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 SUGT1Q9Y2Z0 365 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 A0A1W2PQJ5 194 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 WFS1O76024 890 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 LCA5LO95447 670 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 GUCY1A2P33402 732 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MAGEA1P43355 309 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MECOMQ03112 1051 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 GPC2Q8N158 579 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 AGBL3Q8NEM8 1001 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 FERMT2Q96AC1 680 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 MMTAG2Q9BU76 263 aaKnown RBP11.82□□□□□ -0.52
CHD6-208ENST00000480022 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 NSRP1Q9H0G5 558 aaKnown RBP11.82□□□□□ -0.52
CHD6-208ENST00000480022 GDAQ9Y2T3 454 aa11.82□□□□□ -0.52
CHD6-208ENST00000480022 PJA2O43164 708 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 CREB3O43889 395 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 POLE2P56282 527 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 CMPK2Q5EBM0 449 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 KLHL7Q8IXQ5 586 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 RNF10Q8N5U6 811 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 ARHGEF3Q9NR81 526 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 PCMTD2Q9NV79 361 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 SALL4Q9UJQ4 1053 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 TPD52L2O43399 206 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 PDHA1P08559 390 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 CHN1P15882 459 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 IFNAR1P17181 557 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 ATP6V1C1P21283 382 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 HNRNPH3P31942 346 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 GBP1P32455 592 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 EIF4A3P38919 411 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 GMPSP49915 693 aaPredicted RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 COPS2P61201 443 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 FOXD4Q12950 439 aaPredicted RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 FIGNQ5HY92 759 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 KIF2BQ8N4N8 673 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 ANKRD13CQ8N6S4 541 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 FBF1Q8TES7 1133 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 MTMR8Q96EF0 704 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 TUBGCP2Q9BSJ2 902 aa11.81□□□□□ -0.52
CHD6-208ENST00000480022 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
CHD6-208ENST00000480022 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 BUB1O43683 1085 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 TPP2P29144 1249 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms