RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 CDY2AQ9Y6F7 541 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
CCDC58-205ENST00000479899 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 NCK2O43639 380 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 STAM2O75886 525 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 MMP1P03956 469 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 RB1P06400 928 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 ADAM17P78536 824 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 MGAT3Q09327 533 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
CCDC58-205ENST00000479899 GRIK4Q16099 956 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 ADGRD2Q7Z7M1 963 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
CCDC58-205ENST00000479899 RSPH3Q86UC2 560 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 SMC5Q8IY18 1101 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 FAM49AQ9H0Q0 323 aaPredicted RBP12.37□□□□□ -0.43
CCDC58-205ENST00000479899 TUBE1Q9UJT0 475 aa12.37□□□□□ -0.43
CCDC58-205ENST00000479899 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 CD52P31358 61 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 NUCB1Q02818 461 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 PCNX4Q63HM2 1172 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 NLRX1Q86UT6 975 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 LINC01599Q8WXQ3 324 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 GLG1Q92896 1179 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
CCDC58-205ENST00000479899 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 EHMT1Q9H9B1 1298 aa12.36□□□□□ -0.43
CCDC58-205ENST00000479899 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
CCDC58-205ENST00000479899 MRPL42Q9Y6G3 142 aaKnown RBP12.36□□□□□ -0.43
CCDC58-205ENST00000479899 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 RNF223E7ERA6 249 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 ENPP3O14638 875 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 LILRB3O75022 631 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 ATP9AO75110 1047 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 IGHDP01880 384 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 CYP21A2P08686 494 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 GATMP50440 423 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 HERC4Q5GLZ8 1057 aaPredicted RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 RBM23Q86U06 439 aaKnown RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 KCNH6Q9H252 994 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
CCDC58-205ENST00000479899 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
CCDC58-205ENST00000479899 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 DGKIO75912 1065 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 DNAJB1P25685 340 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 NRIP1P48552 1158 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 MMP16P51512 607 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 PTH1RQ03431 593 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 TROAPQ12815 778 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 UBE2SQ16763 222 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
CCDC58-205ENST00000479899 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 CLP1Q92989 425 aaKnown RBP12.34□□□□□ -0.43
CCDC58-205ENST00000479899 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
CCDC58-205ENST00000479899 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
CCDC58-205ENST00000479899 ERAP1Q9NZ08 941 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 USP34Q70CQ2 3546 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
CCDC58-205ENST00000479899 GSTTP1A0A1W2PQM5 241 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 E7EWF7 191 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 M0QZ92 97 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 M0R296 226 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 MEIS2O14770 477 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 ITGB1P05556 798 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 KCNA2P16389 499 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 RXRAP19793 462 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 PAK2Q13177 524 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 ADAM15Q13444 863 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 MTMR1Q13613 665 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 CAMK1Q14012 370 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 SPOUT1Q5T280 376 aaKnown RBP12.33□□□□□ -0.44
CCDC58-205ENST00000479899 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.44
CCDC58-205ENST00000479899 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
CCDC58-205ENST00000479899 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
CCDC58-205ENST00000479899 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
CCDC58-205ENST00000479899 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms