RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 NSUN4Q96CB9 384 aaKnown RBP14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 AIFM3Q96NN9 605 aa14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 RBM12Q9NTZ6 932 aaKnown RBP14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 RMND1Q9NWS8 449 aa14.35□□□□□ -0.11
CNKSR3-204ENST00000479339 CHGBP05060 677 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 GLI1P08151 1106 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 DNM2P50570 870 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 CUL1Q13616 776 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 LRRC23Q53EV4 343 aaPredicted RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ANKRD20A2Q5SQ80 823 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ANKRD20A1Q5TYW2 823 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ANKRD20A3Q5VUR7 823 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ERO1BQ86YB8 467 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 R3HDMLQ9H3Y0 253 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 MYH2Q9UKX2 1941 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 A0A1W2PQJ5 194 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 E7ENQ6 273 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 RNF8O76064 485 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 MMP1P03956 469 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 GTF2A2P52657 109 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 GRIN1Q05586 938 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ODF2Q5BJF6 829 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 MIGA2Q7L4E1 593 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 APBB1IPQ7Z5R6 666 aaPredicted RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ANKRD23Q86SG2 305 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 NCAPG2Q86XI2 1143 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 GBP7Q8N8V2 638 aaPredicted RBP14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 IFT81Q8WYA0 676 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 EPAS1Q99814 870 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 PTPN18Q99952 460 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 FAM129AQ9BZQ8 928 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 CTNNAL1Q9UBT7 734 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 TFR2Q9UP52 801 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ASB3Q9Y575 518 aa14.34□□□□□ -0.11
CNKSR3-204ENST00000479339 ATRNL1Q5VV63 1379 aa14.33□□□□□ -0.11
CNKSR3-204ENST00000479339 H0YGN5 161 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 FKTNO75072 461 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 BMP15O95972 392 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 PYGLP06737 847 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 GUCY2FP51841 1108 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 RHBDL3P58872 404 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 MXRA7P84157 204 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 FIGNQ5HY92 759 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 NOL9Q5SY16 702 aaKnown RBP14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 ERMARDQ5T6L9 678 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 NFRKBQ6P4R8 1299 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 TBC1D1Q86TI0 1168 aaPredicted RBP14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 CASKIN2Q8WXE0 1202 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 NAF1Q96HR8 494 aaKnown RBP14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 PANK4Q9NVE7 773 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
CNKSR3-204ENST00000479339 ABL2P42684 1182 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 TNNC1P63316 161 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 LACTBP83111 547 aaPredicted RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 ZNF844Q08AG5 666 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 PPIL2Q13356 520 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 TAF11Q15544 211 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 TEKT4Q8WW24 435 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 NELFBQ8WX92 580 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 IFT74Q96LB3 600 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 XPO6Q96QU8 1125 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 MMTAG2Q9BU76 263 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 ISCUQ9H1K1 167 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 DDX4Q9NQI0 724 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 SAMD15Q9P1V8 674 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 LRP2BPQ9P2M1 347 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 LRWD1Q9UFC0 647 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 LCA5LO95447 670 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 HSD17B3P37058 310 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 AFMP43652 599 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 ATP11AP98196 1134 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 MAP3K10Q02779 954 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 PKN2Q16513 984 aaKnown RBP14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 HHATQ5VTY9 493 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 SH3BP5LQ7L8J4 393 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 TRPM8Q7Z2W7 1104 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 PIGWQ7Z7B1 504 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 ATL2Q8NHH9 583 aa14.32□□□□□ -0.12
CNKSR3-204ENST00000479339 RBM41Q96IZ5 413 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms