RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 RPGRIP1Q96KN7 1286 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 PCYT2Q99447 389 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 PHF7Q9BWX1 381 aaPredicted RBP7.61□□□□□ -1.19
VCP-205ENST00000479300 S1PR5Q9H228 398 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 TMX1Q9H3N1 280 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 SMOC2Q9H3U7 446 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 TLR9Q9NR96 1032 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 SLC12A7Q9Y666 1083 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 TAF6LQ9Y6J9 622 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 LOXHD1Q8IVV2 1947 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 DMXL1Q9Y485 3027 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 PROB1E7EW31 1015 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 SLC27A2O14975 620 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 FIBPO43427 364 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 MGEA5O60502 916 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 CDC45O75419 566 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 KCNA2P16389 499 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 MARK3P27448 753 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 SMARCA1P28370 1054 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 TCF7P36402 384 aaPredicted RBP7.6□□□□□ -1.19
VCP-205ENST00000479300 ERVFC1P60507 584 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 MRPS6P82932 125 aaKnown RBP7.6□□□□□ -1.19
VCP-205ENST00000479300 TROAPQ12815 778 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 PPFIA1Q13136 1202 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 NEDD9Q14511 834 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 KRT32Q14532 448 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 GRIK4Q16099 956 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 PKN1Q16512 942 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 PTPN21Q16825 1174 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 BMP2KLQ5H9B9 411 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 CREB3L3Q68CJ9 461 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 TAF2Q6P1X5 1199 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 SYCE2Q6PIF2 218 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 NLRX1Q86UT6 975 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 MB21D2Q8IYB1 491 aaPredicted RBP7.6□□□□□ -1.19
VCP-205ENST00000479300 IGDCC4Q8TDY8 1250 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 MS4A3Q96HJ5 214 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 PRRX2Q99811 253 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 SPZ1Q9BXG8 430 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 TUBE1Q9UJT0 475 aa7.6□□□□□ -1.19
VCP-205ENST00000479300 NAP1L2Q9ULW6 460 aaPredicted RBP7.6□□□□□ -1.19
VCP-205ENST00000479300 FNDC1Q4ZHG4 1894 aaPredicted RBP7.6□□□□□ -1.19
VCP-205ENST00000479300 FSD2A1L4K1 749 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 PRR23AA6NEV1 266 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 SPDYE3A6NKU9 549 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 SH2B2O14492 632 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 MEIS2O14770 477 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 FSCN2O14926 492 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 PPFIA3O75145 1194 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 ITGB5P18084 799 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 SP100P23497 879 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 LIFRP42702 1097 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 TMEM62Q0P6H9 643 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 DUSP6Q16828 381 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 NAALADL2Q58DX5 795 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 PCNX4Q63HM2 1172 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 XRRA1Q6P2D8 792 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 USP17L6PQ6QN14 398 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 NPAS4Q8IUM7 802 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 TMEM105Q8N8V8 129 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 GIMAP8Q8ND71 665 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 FEZF2Q8TBJ5 459 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 TRAPPC12Q8WVT3 735 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 ATOH1Q92858 354 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 NEK1Q96PY6 1258 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 MAP7D2Q96T17 732 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 SENP7Q9BQF6 1050 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 APOL5Q9BWW9 433 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 LSG1Q9H089 658 aaKnown RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 FAM49AQ9H0Q0 323 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 TLE6Q9H808 572 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 LY9Q9HBG7 655 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 RBM28Q9NW13 759 aaKnown RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 ZNF215Q9UL58 517 aaPredicted RBP7.59□□□□□ -1.19
VCP-205ENST00000479300 PADI3Q9ULW8 664 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 KAT6AQ92794 2004 aa7.59□□□□□ -1.19
VCP-205ENST00000479300 IGSF9BQ9UPX0 1349 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
VCP-205ENST00000479300 BRD1O95696 1058 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 SCG2P13521 617 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 INSRRP14616 1297 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 TERF1P54274 439 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 ANTXR2P58335 489 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 IGBP1P78318 339 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 COL9A3Q14050 684 aaPredicted RBP7.58□□□□□ -1.2
VCP-205ENST00000479300 TMEM266Q2M3C6 531 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 MICU3Q86XE3 530 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 FANCBQ8NB91 859 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 TMEM40Q8WWA1 233 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 RIPOR3Q96MK2 946 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 MYL10Q9BUA6 226 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 PSTPIP2Q9H939 334 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 CDHR5Q9HBB8 845 aa7.58□□□□□ -1.2
VCP-205ENST00000479300 WDR70Q9NW82 654 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms