RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TAF7Q15545 349 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 MLANAQ16655 118 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 LONRF2Q1L5Z9 754 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 TTC31Q49AM3 519 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DNAJC21Q5F1R6 531 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 SPECC1Q5M775 1068 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC35F1Q5T1Q4 408 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ADGRF1Q5T601 910 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 BICRALQ6AI39 1079 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PPP4R4Q6NUP7 873 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 NSMFQ6X4W1 530 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PRR23BQ6ZRT6 265 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PPIL6Q8IXY8 311 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ELOA2Q8IYF1 753 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 CLASRPQ8N2M8 674 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 JMYQ8N9B5 988 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 KREMEN2Q8NCW0 462 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 TAF4BQ92750 862 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DIO2Q92813 273 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 OSBP2Q969R2 916 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 CCDC34Q96HJ3 373 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 GPR101Q96P66 508 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 IPO9Q96P70 1041 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DIRC2Q96SL1 478 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 CDC6Q99741 560 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ABCG4Q9H172 646 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 NSUN3Q9H649 340 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 TNFRSF12AQ9NP84 129 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DCP1AQ9NPI6 582 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DONSONQ9NYP3 566 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 GULP1Q9UBP9 304 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 SEL1LQ9UBV2 794 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PCSK1NQ9UHG2 260 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 TPCN1Q9ULQ1 816 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 RABL2BQ9UNT1 228 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 WDR97A6NE52 1622 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 ANKRD18BA2A2Z9 1011 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 ABLIM1O14639 778 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CPLX1O14810 134 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 SKAP2O75563 359 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 ALDH1L1O75891 902 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 LETM1O95202 739 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MSL3P1P0C860 447 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 POU3F3P20264 500 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TACR1P25103 407 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 OAS2P29728 719 aaKnown RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 KIF5BP33176 963 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 GTF2A2P52657 109 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 BPIFB3P59826 476 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MCL1Q07820 350 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CCDC15Q0P6D6 951 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TMEM62Q0P6H9 643 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TTF1Q15361 905 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TOMM20Q15388 145 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 PUM3Q15397 648 aaKnown RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 INF2Q27J81 1249 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 FILIP1LQ4L180 1135 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 ZC3H12BQ5HYM0 836 aaKnown RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CT47A1Q5JQC4 288 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MFSD4BQ5TF39 518 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 YOD1Q5VVQ6 348 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 OLFML2BQ68BL8 750 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MBLAC2Q68D91 279 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CDCA2Q69YH5 1023 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 DENND5AQ6IQ26 1287 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MZT2BQ6NZ67 158 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MZT2AQ6P582 158 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CABP7Q86V35 215 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CCDC103Q8IW40 242 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 SCUBE1Q8IWY4 988 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CPXCR1Q8N123 301 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 LZTR1Q8N653 840 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TTC8Q8TAM2 541 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MAML1Q92585 1016 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 CEP95Q96GE4 821 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC26A8Q96RN1 970 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 NCAPGQ9BPX3 1015 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 HERPUD2Q9BSE4 406 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 MMTAG2Q9BU76 263 aaKnown RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 GTPBP4Q9BZE4 634 aaKnown RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TSPYL1Q9H0U9 437 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 USP25Q9UHP3 1055 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 TMEFF2Q9UIK5 374 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 PNMA8BQ9ULN7 279 aaPredicted RBP4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 RWDD3Q9Y3V2 267 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 SQORQ9Y6N5 450 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 PBRM1Q86U86 1689 aa4.06□□□□□ -1.76
FNDC3B-209ENST00000478016 AQRO60306 1485 aaKnown RBP eCLIP4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SNAPC4Q5SXM2 1469 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 FGD5Q6ZNL6 1462 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 TRBV23-1A0A0A0MS06 115 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 BOLA2-SMG1P6H3BVE0 249 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 hCG_1984214I3L0E3 225 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 HRKO00198 91 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SLC27A2O14975 620 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 SRGAP3O43295 1099 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 E2F6O75461 281 aa4.05□□□□□ -1.76
FNDC3B-209ENST00000478016 FARP2O94887 1054 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms