RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 EYA4O95677 639 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 NR3C1P04150 777 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 JAM2P57087 298 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 PABPC4Q13310 644 aaKnown RBP eCLIP19.77■□□□□ 0.75
CCM2-209ENST00000477605 SLFN11Q7Z7L1 901 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 FBXO11Q86XK2 927 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 SPATS2Q86XZ4 545 aaKnown RBP19.77■□□□□ 0.75
CCM2-209ENST00000477605 BCAS4Q8TDM0 211 aa19.77■□□□□ 0.75
CCM2-209ENST00000477605 EIF3DO15371 548 aaKnown RBP eCLIP19.76■□□□□ 0.75
CCM2-209ENST00000477605 TBCAO75347 108 aaKnown RBP19.76■□□□□ 0.75
CCM2-209ENST00000477605 CPP00450 1065 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 ACTN1P12814 892 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 FERP16591 822 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 SCNN1DP51172 638 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 FKBP1AP62942 108 aaKnown RBP19.76■□□□□ 0.75
CCM2-209ENST00000477605 HDLBPQ00341 1268 aaKnown RBP19.76■□□□□ 0.75
CCM2-209ENST00000477605 TRAF1Q13077 416 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 TATDN1Q6P1N9 297 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 TMEM179Q6ZVK1 233 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 IDI2Q9BXS1 227 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 DNAJC18Q9H819 358 aa19.76■□□□□ 0.75
CCM2-209ENST00000477605 SUCLA2Q9P2R7 463 aaPredicted RBP19.76■□□□□ 0.75
CCM2-209ENST00000477605 HMGB1P1B2RPK0 211 aaPredicted RBP19.75■□□□□ 0.75
CCM2-209ENST00000477605 KCNK3O14649 394 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 RAD51CO43502 376 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 AKAP3O75969 853 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 H2AFZP0C0S5 128 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 FAM153BP0C7A2 387 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 CRKP46108 304 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 PSMC6P62333 389 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 FAM153CQ494X1 144 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 H2AFVQ71UI9 128 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 TPCN2Q8NHX9 752 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 PIK3R5Q8WYR1 880 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 EFCC1Q9HA90 598 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 FAM153AQ9UHL3 310 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 SYNPO2Q9UMS6 1093 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 ZNF233A6NK53 670 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 PGRMC1O00264 195 aaKnown RBP19.75■□□□□ 0.75
CCM2-209ENST00000477605 NFIAQ12857 509 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 B4GALNT4Q76KP1 1039 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 SLC35C1Q96A29 364 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.75■□□□□ 0.75
CCM2-209ENST00000477605 MKNK1Q9BUB5 465 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 SIX2Q9NPC8 291 aa19.75■□□□□ 0.75
CCM2-209ENST00000477605 ATXN2Q99700 1313 aaKnown RBP19.75■□□□□ 0.75
CCM2-209ENST00000477605 ASTN1O14525 1302 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 NPR1P16066 1061 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 NOP2P46087 812 aaKnown RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 CCT5P48643 541 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 BTNL9Q6UXG8 535 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 RASGEF1CQ8N431 466 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 LRRC45Q96CN5 670 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 VAV3Q9UKW4 847 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 ARFGEF1Q9Y6D6 1849 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 MYH10P35580 1976 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 PIK3CDO00329 1044 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 PPP1R12BO60237 982 aaPredicted RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 MUTP22033 750 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 ALDH1B1P30837 517 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 ENOX2Q16206 610 aaKnown RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 SYDE2Q5VT97 1194 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 PODNQ7Z5L7 613 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 RBM46Q8TBY0 533 aaKnown RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 ATP6V1G3Q96LB4 118 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 SLITRK6Q9H5Y7 841 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 TUFT1Q9NNX1 390 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 PACSIN2Q9UNF0 486 aaPredicted RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 STXBP5LQ9Y2K9 1186 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 DIS3Q9Y2L1 958 aaKnown RBP19.74■□□□□ 0.75
CCM2-209ENST00000477605 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 UTRNP46939 3433 aa19.74■□□□□ 0.75
CCM2-209ENST00000477605 UBE4BO95155 1302 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 FAM86B1E9PN63 330 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 F5H6K3 240 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 G3V3G9 751 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 MSH4O15457 936 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 FAM86B2P0C5J1 330 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
CCM2-209ENST00000477605 STAT1P42224 750 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 ICA1Q05084 483 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 KLRC3Q07444 240 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 DCAF8Q5TAQ9 597 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 BORCS6Q96GS4 357 aa19.73■□□□□ 0.75
CCM2-209ENST00000477605 P2RX7Q99572 595 aaKnown RBP19.73■□□□□ 0.75
CCM2-209ENST00000477605 ESYT3A0FGR9 886 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 MEIS1O00470 390 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 CEP104O60308 925 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 DNA2P51530 1060 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 TTC31Q49AM3 519 aaPredicted RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 DCAF17Q5H9S7 520 aaPredicted RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 ZFPM1Q8IX07 1006 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 EIF2AK1Q9BQI3 630 aaKnown RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 PLEKHA4Q9H4M7 779 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 SEL1LQ9UBV2 794 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 TTC7AQ9ULT0 858 aaPredicted RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 ZSCAN5CA6NGD5 496 aaPredicted RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 GCNT3O95395 438 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms