RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	LCHN	A4D1U4	455 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	FFAR3	O14843	346 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	KDM1A	O60341	852 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	RAB11FIP3	O75154	756 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ULK1	O75385	1050 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	APOL3	O95236	402 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRL	P01236	227 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	CDK11B	P21127	795 aa	Known RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	RPL13	P26373	211 aa	Known RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	LSP1	P33241	339 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ECE1	P42892	770 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	MLLT6	P55198	1093 aa	Predicted RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	PHC1	P78364	1004 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	IL13RA1	P78552	427 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ALDH6A1	Q02252	535 aa	Known RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ROM1	Q03395	351 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ADCY1	Q08828	1119 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	TTC38	Q5R3I4	469 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	IQSEC1	Q6DN90	963 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	PHYKPL	Q8IUZ5	450 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZNF610	Q8N9Z0	462 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	CLRN3	Q8NCR9	226 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	COG1	Q8WTW3	980 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	TOX2	Q96NM4	488 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	TUBGCP5	Q96RT8	1024 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	POFUT1	Q9H488	388 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	L2HGDH	Q9H9P8	463 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	KCND1	Q9NSA2	647 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	MSRA	Q9UJ68	235 aa		4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	NOP58	Q9Y2X3	529 aa	Known RBP	4.62	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	SH3D21	A4FU49	640 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	DBX1	A6NMT0	343 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	DDX3X	O00571	662 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	COL6A1	P12109	1028 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZNF28	P17035	718 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	ADCY8	P40145	1251 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	RGS3	P49796	1198 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	SESN3	P58005	492 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	EVA1C	P58658	441 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	CAP1	Q01518	475 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	FAM50A	Q14320	339 aa	Known RBP	4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	LRRC32	Q14392	662 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	WDR72	Q3MJ13	1102 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRR31	Q5SQ13	230 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	GPR158	Q5T848	1215 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	RNF219	Q5W0B1	726 aa	Predicted RBP	4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	SLFN12L	Q6IEE8	588 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	LINC01356	Q8N9X3	169 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRPF38A	Q8NAV1	312 aa	Known RBP	4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	MAML3	Q96JK9	1138 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	BTBD2	Q9BX70	525 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	KRTAP9-9	Q9BYP9	154 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	KRTAP9-4	Q9BYQ2	154 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	BRINP2	Q9C0B6	783 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447	OR10A5	Q9H207	317 aa		4.61	□□□□□ -1.67
TARDBP-208	ENST00000477447		H0Y858	1186 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRKD3	O94806	890 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	KNG1	P01042	644 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	CYP1A1	P04798	512 aa	Predicted RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	APEX1	P27695	318 aa	Known RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	CFP	P27918	469 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	IL13	P35225	146 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	SARS	P49591	514 aa	Known RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	ANAPC15	P60006	121 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	MYBPC3	Q14896	1274 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	TIGD7	Q6NT04	549 aa	Predicted RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	DPP8	Q6V1X1	898 aa	Predicted RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	CARF	Q8N187	725 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	FERMT2	Q96AC1	680 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	SPATA25	Q9BR10	227 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	MYL10	Q9BUA6	226 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZDHHC5	Q9C0B5	715 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	SEMA4A	Q9H3S1	761 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	USP36	Q9P275	1121 aa	Known RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	FTSJ1	Q9UET6	329 aa		4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	NOC2L	Q9Y3T9	749 aa	Known RBP	4.6	□□□□□ -1.67
TARDBP-208	ENST00000477447	PRPF6	O94906	941 aa	Known RBP	4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	CHGB	P05060	677 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	IGBP1	P78318	339 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	CD83	Q01151	205 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	STIL	Q15468	1287 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	KANK2	Q63ZY3	851 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	MCTP2	Q6DN12	878 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	FRMD7	Q6ZUT3	714 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	ESPNL	Q6ZVH7	1005 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	OTOP2	Q7RTS6	562 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	NECAB2	Q7Z6G3	386 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	CXorf67	Q86X51	503 aa	Predicted RBP	4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	C1QL4	Q86Z23	238 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	NUDT10	Q8NFP7	164 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	ADAMTS17	Q8TE56	1095 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	MTMR8	Q96EF0	704 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	NUDT11	Q96G61	164 aa		4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	ZNF496	Q96IT1	587 aa	Predicted RBP	4.59	□□□□□ -1.67
TARDBP-208	ENST00000477447	VTA1	Q9NP79	307 aa		4.59	□□□□□ -1.67

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