RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 STMN4Q9H169 189 aaPredicted RBP16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 NEUROG2Q9H2A3 272 aa16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 UTP11Q9Y3A2 253 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 NOC2LQ9Y3T9 749 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-205ENST00000477264 KIAA1551Q9HCM1 1747 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 CLTAP09496 248 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 MMP13P45452 471 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 DNA2P51530 1060 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 PSMD2Q13200 908 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 RBBP5Q15291 538 aaKnown RBP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 ATXN2LQ8WWM7 1075 aaKnown RBP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 LRRC27Q9C0I9 530 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 AIPL1Q9NZN9 384 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 CEP104O60308 925 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 FLOT1O75955 427 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 CCNG1P51959 295 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 RWDD2BP57060 319 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 BIRC2Q13490 618 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 ASIC2Q16515 512 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 CCDC38Q502W7 563 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 ADGRA1Q86SQ6 560 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.252e-11■■■■■ 33.7
CLSTN1-205ENST00000477264 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 TXLNGYQ9BZA5 131 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
CLSTN1-205ENST00000477264 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 TLR2O60603 784 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 WFS1O76024 890 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 GNA14O95837 355 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 GNAQP50148 359 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 DHX9Q08211 1270 aaKnown RBP16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 AGAP11Q8TF27 550 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 THOC1Q96FV9 657 aaKnown RBP16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 FMO2Q99518 471 aa16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
CLSTN1-205ENST00000477264 CHN1P15882 459 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 GSTO1P78417 241 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 KLHL30Q0D2K2 578 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 KCNMA1Q12791 1236 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 BLMHQ13867 455 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 CLUL1Q15846 466 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 CEP63Q96MT8 703 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 PLIN2Q99541 437 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 SLC5A4Q9NY91 659 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 PCDHA6Q9UN73 950 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 PACSIN2Q9UNF0 486 aaPredicted RBP16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 PCDHA8Q9Y5H6 950 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.25
CLSTN1-205ENST00000477264 KRIT1O00522 736 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 ABLIM1O14639 778 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 AGTP01019 485 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 TBC1D1Q86TI0 1168 aaPredicted RBP16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 LRRC57Q8N9N7 239 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 ZNF570Q96NI8 536 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 ETAA1Q9NY74 926 aa16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 SUCLA2Q9P2R7 463 aaPredicted RBP16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 TTC7AQ9ULT0 858 aaPredicted RBP16.58■□□□□ 0.24
CLSTN1-205ENST00000477264 A0A0A6YYK5 440 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 BACH1O14867 736 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 NKRFO15226 690 aaKnown RBP eCLIP16.57■□□□□ 0.246e-8■□□□□ 10.9
CLSTN1-205ENST00000477264 DAPK3O43293 454 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 AHCYL1O43865 530 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 NOL4O94818 638 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 DDX42Q86XP3 938 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 ZNF384Q8TF68 577 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 KIF9Q9HAQ2 790 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 KCNG1Q9UIX4 513 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 PNMA2Q9UL42 364 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 A0A087X0T9 212 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 O00370 1275 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 SNUPNO95149 360 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 FAM228BP0C875 321 aa16.57■□□□□ 0.24
CLSTN1-205ENST00000477264 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms