RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 LBHD1Q9BQE6 289 aaPredicted RBP18.91■□□□□ 0.62
RPN1-202ENST00000476931 NOC4LQ9BVI4 516 aaKnown RBP18.91■□□□□ 0.62
RPN1-202ENST00000476931 SCAND2PQ9GZW5 306 aaPredicted RBP18.91■□□□□ 0.62
RPN1-202ENST00000476931 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
RPN1-202ENST00000476931 SEPT9Q9UHD8 586 aaPredicted RBP18.91■□□□□ 0.62
RPN1-202ENST00000476931 DBR1Q9UK59 544 aaKnown RBP18.91■□□□□ 0.62
RPN1-202ENST00000476931 KDM3AQ9Y4C1 1321 aa18.91■□□□□ 0.62
RPN1-202ENST00000476931 ZBTB42B2RXF5 422 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 GAS2O43903 313 aaKnown RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 MED24O75448 989 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 MARCKSP29966 332 aaPredicted RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 RFC5P40937 340 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 DNM2P50570 870 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 DNM1Q05193 864 aaKnown RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 TBC1D8BQ0IIM8 1120 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 MFSD5Q6N075 450 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 TRMT1LQ7Z2T5 733 aaKnown RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 SH3RF1Q7Z6J0 888 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 PPP1R13LQ8WUF5 828 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 CEP170P1Q96L14 293 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 FTOQ9C0B1 505 aaKnown RBP eCLIP18.9■□□□□ 0.62
RPN1-202ENST00000476931 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 FBXO2Q9UK22 296 aaPredicted RBP18.9■□□□□ 0.62
RPN1-202ENST00000476931 DNM3Q9UQ16 869 aa18.9■□□□□ 0.62
RPN1-202ENST00000476931 MAFO75444 373 aaPredicted RBP18.89■□□□□ 0.61
RPN1-202ENST00000476931 RFC2P35250 354 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 TXLNAP40222 546 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 HYIQ5T013 277 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 IER5Q5VY09 327 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 FAM43BQ6ZT52 329 aaPredicted RBP18.89■□□□□ 0.61
RPN1-202ENST00000476931 SLC7A3Q8WY07 619 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 CALML4Q96GE6 196 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 CDK5RAP3Q96JB5 506 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 CCDC43Q96MW1 224 aaKnown RBP18.89■□□□□ 0.61
RPN1-202ENST00000476931 CCSER1Q9C0I3 900 aa18.89■□□□□ 0.61
RPN1-202ENST00000476931 WRAP73Q9P2S5 460 aaPredicted RBP18.89■□□□□ 0.61
RPN1-202ENST00000476931 MYH9P35579 1960 aaKnown RBP18.89■□□□□ 0.61
RPN1-202ENST00000476931 KAT6AQ92794 2004 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 CUTAO60888 179 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 C22orf31O95567 290 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 CKBP12277 381 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 SELPP16109 830 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 THPOP40225 353 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 TRIM71Q2Q1W2 868 aaKnown RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 FOXD4L6Q3SYB3 417 aaPredicted RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 MTERF2Q49AM1 385 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 XKR9Q5GH70 373 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 FOXD4L3Q6VB84 417 aaPredicted RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 CABP7Q86V35 215 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 RPUSD2Q8IZ73 545 aaKnown RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 CEP89Q96ST8 783 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 MMTAG2Q9BU76 263 aaKnown RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 CSRNP2Q9H175 543 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 CCDC39Q9UFE4 941 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 ZMYND8Q9ULU4 1186 aaPredicted RBP18.88■□□□□ 0.61
RPN1-202ENST00000476931 KIAA1024Q9UPX6 916 aa18.88■□□□□ 0.61
RPN1-202ENST00000476931 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 H0YGN5 161 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 DGAT1O75907 488 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 IQCF3P0C7M6 154 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 RARRES1P49788 294 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 FAM26DQ5JW98 314 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 EFCAB12Q6NXP0 572 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 KIAA0319LQ8IZA0 1049 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 METTL13Q8N6R0 699 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 TRAPPC12Q8WVT3 735 aa18.87■□□□□ 0.61
RPN1-202ENST00000476931 DHX38Q92620 1227 aaKnown RBP18.87■□□□□ 0.61
RPN1-202ENST00000476931 DDX19AQ9NUU7 478 aaKnown RBP18.87■□□□□ 0.61
RPN1-202ENST00000476931 RSPH10B2B2RC85 870 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 M0QZ92 97 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 PFKMP08237 780 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 RSPH10BP0C881 870 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 SYN1P17600 705 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
RPN1-202ENST00000476931 CDC25AP30304 524 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 POLGP54098 1239 aaPredicted RBP18.86■□□□□ 0.61
RPN1-202ENST00000476931 NPEPPSP55786 919 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 PIGOQ8TEQ8 1089 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 DNAJB3Q8WWF6 145 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 TCP11Q8WWU5 503 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 SPATA32Q96LK8 384 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 MAP7D2Q96T17 732 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 DHX33Q9H6R0 707 aaKnown RBP18.86■□□□□ 0.61
RPN1-202ENST00000476931 SQORQ9Y6N5 450 aa18.86■□□□□ 0.61
RPN1-202ENST00000476931 PP2D1A8MPX8 630 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 ASAP2O43150 1006 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 EYA4O95677 639 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 CYP2C18P33260 490 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 ME1P48163 572 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
RPN1-202ENST00000476931 POTEGQ6S5H5 508 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 RUFY4Q6ZNE9 571 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 LINC01465Q8N7H1 131 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 BADQ92934 168 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 SUGCTQ9HAC7 445 aa18.85■□□□□ 0.61
RPN1-202ENST00000476931 PDE4DIPQ5VU43 2346 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms