RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 MYOGP15173 224 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 SYT1P21579 422 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 SFNP31947 248 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 CLCN3P51790 818 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 GNL2Q13823 731 aaKnown RBP13.99□□□□□ -0.17
APTX-220ENST00000476858 TARBP2Q15633 366 aaKnown RBP13.99□□□□□ -0.17
APTX-220ENST00000476858 LRIT3Q3SXY7 679 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
APTX-220ENST00000476858 KIAA0319LQ8IZA0 1049 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 LINC01465Q8N7H1 131 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
APTX-220ENST00000476858 HERVK_113Q902F9 699 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
APTX-220ENST00000476858 TCEAL9Q9UHQ7 104 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 PCDHA2Q9Y5H9 948 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 CDY2AQ9Y6F7 541 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 CHD9Q3L8U1 2897 aa13.99□□□□□ -0.17
APTX-220ENST00000476858 MYH9P35579 1960 aaKnown RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 RRN3P2A6NIE6 340 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 H3BQV1 296 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 MARCH6O60337 910 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 SLITRK3O94933 977 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 ARHGEF15O94989 841 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 VTNP04004 478 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 OR52Z1P0C646 297 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 GHRP10912 638 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 GNAT1P11488 350 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 TECP42680 631 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 SLC26A2P50443 739 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 RABGGTBP53611 331 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 DEFB103AP81534 67 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 RESTQ13127 1097 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 LPIN1Q14693 890 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 EPHA7Q15375 998 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 ECM1Q16610 540 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 FAM26DQ5JW98 314 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 CCDC155Q8N6L0 562 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 DBF4BQ8NFT6 615 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 TMEM40Q8WWA1 233 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 EIF2AK1Q9BQI3 630 aaKnown RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 LXNQ9BS40 222 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 AGO3Q9H9G7 860 aaKnown RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
APTX-220ENST00000476858 PCDHA12Q9UN75 941 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
APTX-220ENST00000476858 KAT6AQ92794 2004 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 MED24O75448 989 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 SPATA31C1P0DKV0 1188 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
APTX-220ENST00000476858 PTGDRQ13258 359 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 PKP1Q13835 747 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 ZNF484Q5JVG2 852 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 PSRC1Q6PGN9 363 aaPredicted RBP13.97□□□□□ -0.17
APTX-220ENST00000476858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.97□□□□□ -0.17
APTX-220ENST00000476858 SPRED2Q7Z698 418 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 SLFN12Q8IYM2 578 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 HSD17B14Q9BPX1 270 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 YBX2Q9Y2T7 364 aaKnown RBP13.97□□□□□ -0.17
APTX-220ENST00000476858 GBF1Q92538 1859 aa13.97□□□□□ -0.17
APTX-220ENST00000476858 COL1A2P08123 1366 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 SMIM35A0A1B0GVV1 85 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 CDC25AP30304 524 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 RFC2P35250 354 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 QARSP47897 775 aaKnown RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 PSMC5P62195 406 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 GRIN1Q05586 938 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 TMEM266Q2M3C6 531 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 PLEKHG4Q58EX7 1191 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 XKR3Q5GH77 459 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 FBXO47Q5MNV8 452 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 TAF2Q6P1X5 1199 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 TPH2Q8IWU9 490 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 LINC01599Q8WXQ3 324 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 NIFKQ9BYG3 293 aaKnown RBP13.96□□□□□ -0.17
APTX-220ENST00000476858 METRNQ9UJH8 293 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 EVPLQ92817 2033 aa13.96□□□□□ -0.17
APTX-220ENST00000476858 LOXHD1Q8IVV2 1947 aa13.96□□□□□ -0.18
APTX-220ENST00000476858 ARID2Q68CP9 1835 aa13.95□□□□□ -0.18
APTX-220ENST00000476858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
APTX-220ENST00000476858 GPR32O75388 356 aa13.95□□□□□ -0.18
APTX-220ENST00000476858 CSDE1O75534 798 aaKnown RBP13.95□□□□□ -0.18
APTX-220ENST00000476858 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
APTX-220ENST00000476858 CD52P31358 61 aa13.95□□□□□ -0.18
APTX-220ENST00000476858 TRAPPC10P48553 1259 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms