RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 WTAPQ15007 396 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 PLCB4Q15147 1175 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-213ENST00000476777 NME8Q8N427 588 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 AZI2Q9H6S1 392 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 CWH43Q9H720 699 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 JPH1Q9HDC5 661 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-213ENST00000476777 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 EVPLQ92817 2033 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 SMIM35A0A1B0GVV1 85 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 ERICH2A1L162 156 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 C9IYK1 514 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 MAFGO15525 162 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 BRD1O95696 1058 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 CYP21A2P08686 494 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 HOXB8P17481 243 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-213ENST00000476777 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 PLPP4Q5VZY2 271 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
BRCA1-213ENST00000476777 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
BRCA1-213ENST00000476777 ADAM2Q99965 735 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
BRCA1-213ENST00000476777 NR2E1Q9Y466 385 aa13.03□□□□□ -0.32
BRCA1-213ENST00000476777 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.32
BRCA1-213ENST00000476777 GPR179Q6PRD1 2367 aa13.02□□□□□ -0.32
BRCA1-213ENST00000476777 ACACBO00763 2458 aa13.02□□□□□ -0.32
BRCA1-213ENST00000476777 DENND3A2RUS2 1198 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 STAT5BP51692 787 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 PLCB3Q01970 1234 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
BRCA1-213ENST00000476777 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 PLPPR4Q7Z2D5 763 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 CHD1LQ86WJ1 897 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 IGDCC4Q8TDY8 1250 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 TMEM40Q8WWA1 233 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
BRCA1-213ENST00000476777 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 SLC9A2Q9UBY0 812 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 SORCS3Q9UPU3 1222 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 GINS2Q9Y248 185 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.33
BRCA1-213ENST00000476777 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 FGFR1P11362 822 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 LAG3P18627 525 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 PDE4AP27815 886 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ANTXR2P58335 489 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ACTR2P61160 394 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 FAM189BP81408 668 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 UBE2SQ16763 222 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ERMP1Q7Z2K6 904 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 KIAA0319LQ8IZA0 1049 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ADAM7Q9H2U9 754 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 NGRNQ9NPE2 291 aaKnown RBP13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ENTPD7Q9NQZ7 604 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 SEC63Q9UGP8 760 aaKnown RBP13.01□□□□□ -0.33
BRCA1-213ENST00000476777 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
BRCA1-213ENST00000476777 ST3GAL5Q9UNP4 418 aa13.01□□□□□ -0.33
BRCA1-213ENST00000476777 KLRC1P26715 233 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 NUCB1Q02818 461 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 LRRC55Q6ZSA7 311 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
BRCA1-213ENST00000476777 NCOA7Q8NI08 942 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 CYP2W1Q8TAV3 490 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 CASP10Q92851 521 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 NECTIN4Q96NY8 510 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 MYL10Q9BUA6 226 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 TMEM161AQ9NX61 479 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
BRCA1-213ENST00000476777 NFASCO94856 1347 aa12.99□□□□□ -0.33
BRCA1-213ENST00000476777 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms