RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CCDC60Q8IWA6 550 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-219ENST00000476625 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 ATP8B4Q8TF62 1192 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 OSMRQ99650 979 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 CWH43Q9H720 699 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 AGO4Q9HCK5 861 aaKnown RBP13.69□□□□□ -0.22
HDAC6-219ENST00000476625 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
HDAC6-219ENST00000476625 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
HDAC6-219ENST00000476625 ZBTB42B2RXF5 422 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 VTNP04004 478 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 WEE2P0C1S8 567 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 STAG3L1P0CL83 205 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 STAT5BP51692 787 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 KIZQ2M2Z5 673 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 KANK3Q6NY19 840 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 BMP8AQ7Z5Y6 402 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 KIAA0319LQ8IZA0 1049 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 SUSD6Q92537 303 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 CDHR1Q96JP9 859 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-219ENST00000476625 FTHL17Q9BXU8 183 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 TLR9Q9NR96 1032 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 PCDHB7Q9Y5E2 793 aa13.68□□□□□ -0.22
HDAC6-219ENST00000476625 SMIM35A0A1B0GVV1 85 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 C9IYK1 514 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 FSCN2O14926 492 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 SLC27A2O14975 620 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 TECP42680 631 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 KCNC3Q14003 757 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 NAALADL2Q58DX5 795 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
HDAC6-219ENST00000476625 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 SNX27Q96L92 541 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 ANO3Q9BYT9 981 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
HDAC6-219ENST00000476625 S1PR5Q9H228 398 aa13.67□□□□□ -0.22
HDAC6-219ENST00000476625 NFASCO94856 1347 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 DENND4AQ7Z401 1863 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 IGKV6D-21A0A0A0MT36 114 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 DENND3A2RUS2 1198 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 H0Y858 1186 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 BACH1O14867 736 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 FGFR4P22455 802 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 SMARCA1P28370 1054 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 PTPN5P54829 565 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 NAPAP54920 295 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 SIGLEC14Q08ET2 396 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 PLPPR4Q7Z2D5 763 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
HDAC6-219ENST00000476625 FAM86B1E9PN63 330 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 ATG7O95352 703 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 C22orf31O95567 290 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 FAM86B2P0C5J1 330 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 AVPR2P30518 371 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 MCM5P33992 734 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 CLCN3P51790 818 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 DSC3Q14574 896 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 ANKRD54Q6NXT1 300 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 ABHD15Q6UXT9 468 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 CASD1Q96PB1 797 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 TCF25Q9BQ70 676 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 LZTS2Q9BRK4 669 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 SLC12A7Q9Y666 1083 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 C2orf16Q68DN1 1984 aa13.65□□□□□ -0.22
HDAC6-219ENST00000476625 DHX15O43143 795 aaKnown RBP13.64□□□□□ -0.23
HDAC6-219ENST00000476625 GFRA3O60609 400 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 GPR32O75388 356 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 GNAQP50148 359 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 FUT2Q10981 343 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 AAMPQ13685 434 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 CEP55Q53EZ4 464 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 PDXDC2PQ6P474 469 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-219ENST00000476625 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 AUTS2Q8WXX7 1259 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms