RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 LRP10Q7Z4F1 713 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 KIAA0907Q7Z7F0 614 aaPredicted RBP7.43□□□□□ -1.22
NUP58-209ENST00000476553 MRGPRGQ86SM5 289 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 PIP4K2CQ8TBX8 421 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 ZNF483Q8TF39 744 aaPredicted RBP7.43□□□□□ -1.22
NUP58-209ENST00000476553 SEC16BQ96JE7 1060 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 SCYL1Q96KG9 808 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 CCDC140Q96MF4 163 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 DPYSL5Q9BPU6 564 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 CARD11Q9BXL7 1154 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 HOMER2Q9NSB8 354 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 THRAP3Q9Y2W1 955 aaKnown RBP7.43□□□□□ -1.22
NUP58-209ENST00000476553 DMRT1Q9Y5R6 373 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 MATN2O00339 956 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 EVA1CP58658 441 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 RASA3Q14644 834 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 PAN2Q504Q3 1202 aaKnown RBP7.42□□□□□ -1.22
NUP58-209ENST00000476553 ZNF808Q8N4W9 903 aaPredicted RBP7.42□□□□□ -1.22
NUP58-209ENST00000476553 SH3TC2Q8TF17 1288 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 DEPDC7Q96QD5 511 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 TRIM55Q9BYV6 548 aa7.42□□□□□ -1.22
NUP58-209ENST00000476553 ZNF839A8K0R7 811 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 KIF3BO15066 747 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 MAKP20794 623 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 POLD1P28340 1107 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 MASP1P48740 699 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 ANKS3Q6ZW76 656 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 ZNF627Q7L945 461 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 HOMER1Q86YM7 354 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 OR14A2Q96R54 314 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 PLA2G12BQ9BX93 195 aa7.41□□□□□ -1.22
NUP58-209ENST00000476553 ZNF703Q9H7S9 590 aaPredicted RBP7.41□□□□□ -1.22
NUP58-209ENST00000476553 CCDC189A1A4V9 331 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 KLF4O43474 513 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 PLIN1O60240 522 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 CUTAO60888 179 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 GNALP38405 381 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 PFKPQ01813 784 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 TOP3AQ13472 1001 aaPredicted RBP7.4□□□□□ -1.22
NUP58-209ENST00000476553 RAB33AQ14088 237 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 SLC35F1Q5T1Q4 408 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 LRCH2Q5VUJ6 765 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 KRBA2Q6ZNG9 492 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 MSL2Q9HCI7 577 aa7.4□□□□□ -1.22
NUP58-209ENST00000476553 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 CDC14BO60729 498 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 NASPP49321 788 aaPredicted RBP7.39□□□□□ -1.23
NUP58-209ENST00000476553 EXOSC10Q01780 885 aaKnown RBP7.39□□□□□ -1.23
NUP58-209ENST00000476553 TUSC3Q13454 348 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 SAFB2Q14151 953 aaKnown RBP eCLIP7.39□□□□□ -1.23
NUP58-209ENST00000476553 ZMAT1Q5H9K5 638 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 Q6ZPA2 131 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 UHMK1Q8TAS1 419 aaKnown RBP7.39□□□□□ -1.23
NUP58-209ENST00000476553 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
NUP58-209ENST00000476553 ESYT3A0FGR9 886 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 CAND2O75155 1236 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 CAPNS1P04632 268 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 ENO2P09104 434 aaPredicted RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 KRT4P19013 534 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 COL10A1Q03692 680 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 HDAC1Q13547 482 aaPredicted RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 NFYCQ13952 458 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 DHX8Q14562 1220 aaKnown RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 SCUBE1Q8IWY4 988 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 TSR2Q969E8 191 aaKnown RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 PRRX2Q99811 253 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 TACO1Q9BSH4 297 aaKnown RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 JAM3Q9BX67 310 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
NUP58-209ENST00000476553 CEP72Q9P209 647 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 TELO2Q9Y4R8 837 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 RPS6KL1Q9Y6S9 549 aa7.38□□□□□ -1.23
NUP58-209ENST00000476553 LTFP02788 710 aa7.37□□□□□ -1.23
NUP58-209ENST00000476553 ETFBP38117 255 aa7.37□□□□□ -1.23
NUP58-209ENST00000476553 KCNJ6P48051 423 aa7.37□□□□□ -1.23
NUP58-209ENST00000476553 WDR75Q8IWA0 830 aaKnown RBP7.37□□□□□ -1.23
NUP58-209ENST00000476553 RBM12BQ8IXT5 1001 aaKnown RBP7.37□□□□□ -1.23
NUP58-209ENST00000476553 FAM9BQ8IZU0 186 aa7.37□□□□□ -1.23
NUP58-209ENST00000476553 PPARGC1AQ9UBK2 798 aaKnown RBP7.37□□□□□ -1.23
NUP58-209ENST00000476553 LDHAP00338 332 aaKnown RBP7.36□□□□□ -1.23
NUP58-209ENST00000476553 FBLP22087 321 aaKnown RBP7.36□□□□□ -1.23
NUP58-209ENST00000476553 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
NUP58-209ENST00000476553 ETV4P43268 484 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 C16orf86Q6ZW13 317 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 RAVER1Q8IY67 606 aaKnown RBP7.36□□□□□ -1.23
NUP58-209ENST00000476553 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 CFHR4Q92496 578 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 SLC39A13Q96H72 371 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 FEZ1Q99689 392 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 TLR9Q9NR96 1032 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 TMEM260Q9NX78 707 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 STRIP2Q9ULQ0 834 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 NR2E1Q9Y466 385 aa7.36□□□□□ -1.23
NUP58-209ENST00000476553 FOXL1Q12952 345 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms