RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLFN13Q68D06 897 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 LRRC31Q6UY01 552 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 SP8Q8IXZ3 490 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 KIF2BQ8N4N8 673 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 MAGOHBQ96A72 148 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 SAAL1Q96ER3 474 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 CLMNQ96JQ2 1002 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 SHANK3Q9BYB0 1731 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 COL1A1P02452 1464 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 TCRBV5S4A2TA0A5A2 114 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 GLI1P08151 1106 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 NR1D1P20393 614 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ATP2B4P23634 1241 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 LONP1P36776 959 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ECE1P42892 770 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 SOX10P56693 466 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ZBED6P86452 979 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ICA1Q05084 483 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 KCNH2Q12809 1159 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 SEZ6Q53EL9 994 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 HIBCHQ6NVY1 386 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 CDC42EP5Q6NZY7 148 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 CDR2LQ86X02 465 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 TSEN2Q8NCE0 465 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 TEKT1Q969V4 418 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ELAC2Q9BQ52 826 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FAM167BQ9BTA0 163 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 OSGEPQ9NPF4 335 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 IL17RBQ9NRM6 502 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 TMOD2Q9NZR1 351 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 K7ENM7 598 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 LGR5O75473 907 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 MYBP10242 640 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 PLCG2P16885 1265 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 COASYQ13057 564 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 PAK2Q13177 524 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 COG2Q14746 738 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 CRY2Q49AN0 593 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 EP400NLQ6ZTU2 488 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FAM178BQ8IXR5 827 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ADSSL1Q8N142 457 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ZIM3Q96PE6 472 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ARHGAP20Q9P2F6 1191 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ANKFY1Q9P2R3 1169 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 C4BP0C0L5 1744 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 VIRMAQ69YN4 1812 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ARHGEF35A5YM69 484 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 WNT10BO00744 389 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 GAS7O60861 476 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 GH2P01242 217 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 ZNF18P17022 549 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 EIF2AK2P19525 551 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 MCM3P25205 808 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 BRD2P25440 801 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 JAG1P78504 1218 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 EML3Q32P44 896 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 CERKLQ49MI3 558 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 PRUNE1Q86TP1 453 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 TMEM139Q8IV31 216 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 C1orf54Q8WWF1 131 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 EXOC4Q96A65 974 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 ZNF653Q96CK0 615 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 UBE2TQ9NPD8 197 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 MKRN1Q9UHC7 482 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 DBR1Q9UK59 544 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 HPCAL4Q9UM19 191 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 UTP11Q9Y3A2 253 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 COL4A3BPQ9Y5P4 624 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 SYNJ2BP-COX16A0A087WUM0 186 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 RAD51CO43502 376 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 CD58P19256 250 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 GSTO1P78417 241 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 MAN2A1Q16706 1144 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 SLC10A5Q5PT55 438 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 SCARA5Q6ZMJ2 495 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 PACS2Q86VP3 889 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 ADGRF4Q8IZF3 695 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 MICAL1Q8TDZ2 1067 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 OTUD5Q96G74 571 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 PAGR1Q9BTK6 254 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 SEMA6BQ9H3T3 888 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 COX16Q9P0S2 106 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 HACL1Q9UJ83 578 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 FBXL5Q9UKA1 691 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 L1RE1Q9UN81 338 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 FRMD4BQ9Y2L6 1034 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 REXO2Q9Y3B8 237 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 E2F8A0AVK6 867 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 DCAF8L1A6NGE4 600 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 GOLGA8RI6L899 631 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 DDAH1O94760 285 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 STAT1P42224 750 aa5.42□□□□□ -1.54
CCDC39-204ENST00000476379 CLNS1AP54105 237 aaKnown RBP5.42□□□□□ -1.54
CCDC39-204ENST00000476379 HIRAP54198 1017 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms