RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PPME1Q9Y570 386 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 TANC1Q9C0D5 1861 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 UMODL1Q5DID0 1318 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 C22orf31O95567 290 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 YEATS4O95619 227 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 MARCKSP29966 332 aaPredicted RBP33.05■■■□□ 2.88
HOXB3-208ENST00000476342 LONP1P36776 959 aaKnown RBP33.05■■■□□ 2.88
HOXB3-208ENST00000476342 TBC1D8BQ0IIM8 1120 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 TARBP2Q15633 366 aaKnown RBP33.05■■■□□ 2.88
HOXB3-208ENST00000476342 TMEM199Q8N511 208 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 BADQ92934 168 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 WNT8BQ93098 351 aa33.05■■■□□ 2.88
HOXB3-208ENST00000476342 TMEM150BA6NC51 233 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 CKBP12277 381 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 THPOP40225 353 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 TRIM71Q2Q1W2 868 aaKnown RBP33.04■■■□□ 2.88
HOXB3-208ENST00000476342 PLA2G4FQ68DD2 849 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 RUFY4Q6ZNE9 571 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 LINC00301Q8NCQ3 95 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 CCDC43Q96MW1 224 aaKnown RBP33.04■■■□□ 2.88
HOXB3-208ENST00000476342 CYP26B1Q9NR63 512 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 TSHZ2Q9NRE2 1034 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 SRPRBQ9Y5M8 271 aaKnown RBP33.04■■■□□ 2.88
HOXB3-208ENST00000476342 EVPLQ92817 2033 aa33.04■■■□□ 2.88
HOXB3-208ENST00000476342 SMIM35A0A1B0GVV1 85 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 MDM2Q00987 491 aaPredicted RBP33.03■■■□□ 2.88
HOXB3-208ENST00000476342 RPAINQ86UA6 219 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 ZBTB10Q96DT7 871 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 CEP170P1Q96L14 293 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 ANKEF1Q9NU02 776 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 RBM19Q9Y4C8 960 aaKnown RBP33.03■■■□□ 2.88
HOXB3-208ENST00000476342 ARID2Q68CP9 1835 aa33.03■■■□□ 2.88
HOXB3-208ENST00000476342 PP2D1A8MPX8 630 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 XRCC6P12956 609 aaKnown RBP eCLIP33.02■■■□□ 2.888e-6■■□□□ 12.6
HOXB3-208ENST00000476342 SELPP16109 830 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 CCL23P55773 120 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 DNM1Q05193 864 aaKnown RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 POTEGQ6S5H5 508 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 EXOC8Q8IYI6 725 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 NACC1Q96RE7 527 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 WNT8AQ9H1J5 351 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 FBXO2Q9UK22 296 aaPredicted RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 KDM3AQ9Y4C1 1321 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 SPTLC2O15270 562 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 CDC25AP30304 524 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 MAGEA10P43363 369 aaPredicted RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 XKR9Q5GH70 373 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 PRPF38BQ5VTL8 546 aaKnown RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 LRRC8DQ7L1W4 858 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 METTL13Q8N6R0 699 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 DNAJB3Q8WWF6 145 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 JPH2Q9BR39 696 aaPredicted RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 SH2D3AQ9BRG2 576 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 FAM49AQ9H0Q0 323 aaPredicted RBP33.02■■■□□ 2.88
HOXB3-208ENST00000476342 PCDH10Q9P2E7 1040 aa33.02■■■□□ 2.88
HOXB3-208ENST00000476342 PARNO95453 639 aaKnown RBP33.01■■■□□ 2.87
HOXB3-208ENST00000476342 TMOD1P28289 359 aa33.01■■■□□ 2.87
HOXB3-208ENST00000476342 NPEPPSP55786 919 aa33.01■■■□□ 2.87
HOXB3-208ENST00000476342 FPGSQ05932 587 aa33.01■■■□□ 2.87
HOXB3-208ENST00000476342 ZNF618Q5T7W0 954 aa33.01■■■□□ 2.87
HOXB3-208ENST00000476342 KRI1Q8N9T8 703 aaKnown RBP33.01■■■□□ 2.87
HOXB3-208ENST00000476342 CIZ1Q9ULV3 898 aaPredicted RBP33.01■■■□□ 2.87
HOXB3-208ENST00000476342 LOXHD1Q8IVV2 1947 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 PPP6R2O75170 966 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 IQCF3P0C7M6 154 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 UBA7P41226 1012 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 KRT85P78386 507 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 GRIN1Q05586 938 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 EFCAB12Q6NXP0 572 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 NME8Q8N427 588 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 PIGOQ8TEQ8 1089 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 SLC7A3Q8WY07 619 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 SCLYQ96I15 445 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 CEP89Q96ST8 783 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 MMTAG2Q9BU76 263 aaKnown RBP33■■■□□ 2.87
HOXB3-208ENST00000476342 NT5C3AQ9H0P0 336 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 KIAA1024Q9UPX6 916 aa33■■■□□ 2.87
HOXB3-208ENST00000476342 ZBTB39O15060 712 aa32.99■■■□□ 2.87
HOXB3-208ENST00000476342 SLC26A4O43511 780 aa32.99■■■□□ 2.87
HOXB3-208ENST00000476342 PPIGQ13427 754 aaKnown RBP eCLIP32.99■■■□□ 2.87
HOXB3-208ENST00000476342 CABP7Q86V35 215 aa32.99■■■□□ 2.87
HOXB3-208ENST00000476342 KCNG4Q8TDN1 519 aa32.99■■■□□ 2.87
HOXB3-208ENST00000476342 CDK5RAP3Q96JB5 506 aa32.99■■■□□ 2.87
HOXB3-208ENST00000476342 RSPH10B2B2RC85 870 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 M0QZ92 97 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 CTSHP09668 335 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 RSPH10BP0C881 870 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 CSF2RAP15509 400 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 RFC2P35250 354 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 RFC5P40937 340 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 RARRES1P49788 294 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 POLGP54098 1239 aaPredicted RBP32.98■■■□□ 2.87
HOXB3-208ENST00000476342 KCTD17Q8N5Z5 321 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 MAP7D2Q96T17 732 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 CSRNP2Q9H175 543 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 SUGCTQ9HAC7 445 aa32.98■■■□□ 2.87
HOXB3-208ENST00000476342 DDX19AQ9NUU7 478 aaKnown RBP32.98■■■□□ 2.87
HOXB3-208ENST00000476342 DBR1Q9UK59 544 aaKnown RBP32.98■■■□□ 2.87
HOXB3-208ENST00000476342 MAFO75444 373 aaPredicted RBP32.97■■■□□ 2.87
HOXB3-208ENST00000476342 NCLP19338 710 aaKnown RBP32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms